RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FAM74A4Q5TZK3 123 aa5.84□□□□□ -1.47
CSDE1-214ENST00000530886 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
CSDE1-214ENST00000530886 CRPP02741 224 aa5.84□□□□□ -1.47
CSDE1-214ENST00000530886 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
CSDE1-214ENST00000530886 IGHV3-49A0A0A0MS15 119 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 BLCAPP62952 87 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 BSPH1Q075Z2 132 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 LINC00482Q8N8I6 264 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 MINOS1-NBL1R4GNA1 71 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 NDUFA4O00483 81 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 FAM19A1Q7Z5A9 133 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-214ENST00000530886 IGKV2-29A2NJV5 120 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-214ENST00000530886 SMIM1B2RUZ4 78 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 COL12A1Q99715 3063 aa5.83□□□□□ -1.48
CSDE1-214ENST00000530886 IGKV2-28A0A075B6P5 120 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 IGKV2D-28P01615 120 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 PIK3CD-AS1Q5SR53 167 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 ORMDL1Q9P0S3 153 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 NCR3O14931 201 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 Q6ZRU5 148 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 SMIM11BQ8TCY0 68 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-214ENST00000530886 ATP6V0E1O15342 81 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 MIR7-3HGQ8N6C7 128 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
CSDE1-214ENST00000530886 F6UB75 175 aa5.81□□□□□ -1.48
CSDE1-214ENST00000530886 F8WEM9 126 aa5.81□□□□□ -1.48
CSDE1-214ENST00000530886 HOXD3P31249 432 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-214ENST00000530886 E7EQL1 145 aa5.81□□□□□ -1.48
CSDE1-214ENST00000530886 ERC2-IT1O76042 136 aa5.81□□□□□ -1.48
CSDE1-214ENST00000530886 LY6G6DO95868 133 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 DEFB1P60022 68 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 RNASE13Q5GAN3 156 aaKnown RBP5.8□□□□□ -1.48
CSDE1-214ENST00000530886 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 UBL5Q9BZL1 73 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 COX6A2Q02221 97 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 IGHV1OR15-1A0A075B7D0 117 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 PLAC8L1A1L4L8 177 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 ECSCRQ19T08 205 aa5.8□□□□□ -1.48
CSDE1-214ENST00000530886 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
CSDE1-214ENST00000530886 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 LINC00467Q9BRT7 94 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 LECT2O14960 151 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 PLA2G2CQ5R387 149 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 IGFL3Q6UXB1 125 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 WFDC9Q8NEX5 89 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 RMI2Q96E14 147 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 IGHV3OR16-12A0A075B7B8 117 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 NBL1P41271 181 aa5.79□□□□□ -1.48
CSDE1-214ENST00000530886 CXCL6P80162 114 aa5.78□□□□□ -1.48
CSDE1-214ENST00000530886 UNQ9165/PRO28630Q6UXU0 137 aa5.78□□□□□ -1.48
CSDE1-214ENST00000530886 SND1-IT1Q9HBX3 110 aa5.78□□□□□ -1.48
CSDE1-214ENST00000530886 LYNX1G3V0Z9 82 aa5.78□□□□□ -1.48
CSDE1-214ENST00000530886 LYNX1P0DP58 116 aa5.78□□□□□ -1.48
CSDE1-214ENST00000530886 Q8NA96 180 aa5.78□□□□□ -1.48
CSDE1-214ENST00000530886 TMEM256-PLSCR3K7ERE1 68 aa5.77□□□□□ -1.49
CSDE1-214ENST00000530886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-214ENST00000530886 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
CSDE1-214ENST00000530886 C11orf72Q8NBR9 251 aa5.77□□□□□ -1.49
CSDE1-214ENST00000530886 MIFP14174 115 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 G3V318 75 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 PKDREJQ9NTG1 2253 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 A0A0U1RRA0 63 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
CSDE1-214ENST00000530886 CD164Q04900 197 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 RPL36ALQ969Q0 106 aaKnown RBP5.76□□□□□ -1.49
CSDE1-214ENST00000530886 SIRPDQ9H106 197 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 SNURFQ9Y675 71 aa5.76□□□□□ -1.49
CSDE1-214ENST00000530886 ABCA4P78363 2273 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 SPTBN2O15020 2390 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 TRAV10A0A0B4J240 114 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 H3BUA1 57 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 LINC01547P58512 204 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-214ENST00000530886 ROS1P08922 2347 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 A0A1W2PRX2 142 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 K7EMT4 169 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 ESRGQ1W209 222 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 FAM229BQ4G0N7 80 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 BPESC1Q9GZL8 116 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 POLEQ07864 2286 aa5.75□□□□□ -1.49
CSDE1-214ENST00000530886 RHPN1-AS1Q9BWJ2 59 aa5.74□□□□□ -1.49
CSDE1-214ENST00000530886 Q6ZQT0 140 aa5.74□□□□□ -1.49
CSDE1-214ENST00000530886 USMG5Q96IX5 58 aa5.74□□□□□ -1.49
CSDE1-214ENST00000530886 IGHV3-53P01767 116 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 CCL18P55774 89 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 SNRPD3P62318 126 aaKnown RBP5.73□□□□□ -1.49
CSDE1-214ENST00000530886 Q8N814 137 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 C5orf56Q8N8D9 126 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 MED13LQ71F56 2210 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 TRBV6-4A0A1B0GX49 114 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 IL17DQ8TAD2 202 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 SLPIP03973 132 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 PRO3102Q9H379 93 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms