RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
USH1C-205ENST00000527020 NOTCH3Q9UM47 2321 aa12.56□□□□□ -0.4
USH1C-205ENST00000527020 K7EQD1 137 aa12.56□□□□□ -0.4
USH1C-205ENST00000527020 SMCPP49901 116 aaPredicted RBP12.56□□□□□ -0.4
USH1C-205ENST00000527020 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
USH1C-205ENST00000527020 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
USH1C-205ENST00000527020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.56□□□□□ -0.4
USH1C-205ENST00000527020 J3QKU1 62 aa12.55□□□□□ -0.4
USH1C-205ENST00000527020 PSMB2P49721 201 aa12.55□□□□□ -0.4
USH1C-205ENST00000527020 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
USH1C-205ENST00000527020 FAM110AQ9BQ89 295 aa12.55□□□□□ -0.4
USH1C-205ENST00000527020 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
USH1C-205ENST00000527020 NDUFA12Q9UI09 145 aa12.55□□□□□ -0.4
USH1C-205ENST00000527020 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
USH1C-205ENST00000527020 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
USH1C-205ENST00000527020 HILS1P60008 231 aa12.54□□□□□ -0.4
USH1C-205ENST00000527020 IGLV5-45A0A087WSX0 123 aa12.54□□□□□ -0.4
USH1C-205ENST00000527020 DAZ2Q13117 558 aaKnown RBP12.54□□□□□ -0.4
USH1C-205ENST00000527020 CDKN2A-AS1Q9UH64 79 aa12.54□□□□□ -0.4
USH1C-205ENST00000527020 A0A0B4J2C4 111 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 TCL1BO95988 128 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
USH1C-205ENST00000527020 ADAMTSL4-AS1Q5T5F5 129 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 TIRAPP58753 221 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
USH1C-205ENST00000527020 COX6A2Q02221 97 aa12.53□□□□□ -0.4
USH1C-205ENST00000527020 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
USH1C-205ENST00000527020 GEMIN7Q9H840 131 aaKnown RBP12.53□□□□□ -0.4
USH1C-205ENST00000527020 SBSPONQ8IVN8 264 aa12.52□□□□□ -0.4
USH1C-205ENST00000527020 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.4
USH1C-205ENST00000527020 ZFAND6Q6FIF0 208 aa12.52□□□□□ -0.41
USH1C-205ENST00000527020 NDUFA7O95182 113 aa12.51□□□□□ -0.41
USH1C-205ENST00000527020 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
USH1C-205ENST00000527020 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
USH1C-205ENST00000527020 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
USH1C-205ENST00000527020 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
USH1C-205ENST00000527020 SMR3AQ99954 134 aa12.51□□□□□ -0.41
USH1C-205ENST00000527020 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
USH1C-205ENST00000527020 GAGE12JA6NER3 117 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 INSL3P51460 131 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 GAGE4Q13068 117 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 GAGE5Q13069 117 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 SPANXDQ9BXN6 97 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 SPANXCQ9NY87 97 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 LINC00242Q5T6M2 205 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 TMEM101Q96IK0 257 aa12.5□□□□□ -0.41
USH1C-205ENST00000527020 KRTAP10-3P60369 221 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 CSDC2Q9Y534 153 aaKnown RBP12.49□□□□□ -0.41
USH1C-205ENST00000527020 TRBV20-1A0A075B6N2 111 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.49□□□□□ -0.41
USH1C-205ENST00000527020 GAGE7O76087 117 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 GAGE12FP0CL80 117 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 GAGE12GP0CL81 117 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 GAGE12IP0CL82 117 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 FAM19A3Q7Z5A8 133 aa12.49□□□□□ -0.41
USH1C-205ENST00000527020 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
USH1C-205ENST00000527020 FASNP49327 2511 aaKnown RBP12.48□□□□□ -0.41
USH1C-205ENST00000527020 MIAQ16674 131 aa12.47□□□□□ -0.41
USH1C-205ENST00000527020 ERG28Q9UKR5 140 aa12.47□□□□□ -0.41
USH1C-205ENST00000527020 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
USH1C-205ENST00000527020 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
USH1C-205ENST00000527020 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
USH1C-205ENST00000527020 NDUFA1O15239 70 aa12.46□□□□□ -0.41
USH1C-205ENST00000527020 PRSS2P07478 247 aa12.46□□□□□ -0.41
USH1C-205ENST00000527020 C1QTNF4Q9BXJ3 329 aa12.46□□□□□ -0.41
USH1C-205ENST00000527020 H7C2G1 150 aa12.46□□□□□ -0.42
USH1C-205ENST00000527020 SCGB1C2P0DMR2 95 aa12.46□□□□□ -0.42
USH1C-205ENST00000527020 HERVK_113P63121 156 aa12.46□□□□□ -0.42
USH1C-205ENST00000527020 CDC42SE2Q9NRR3 84 aa12.46□□□□□ -0.42
USH1C-205ENST00000527020 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
USH1C-205ENST00000527020 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
USH1C-205ENST00000527020 J3QR89 54 aa12.45□□□□□ -0.42
USH1C-205ENST00000527020 TIMM17BO60830 172 aa12.45□□□□□ -0.42
USH1C-205ENST00000527020 GTSF1LQ9H1H1 148 aa12.45□□□□□ -0.42
USH1C-205ENST00000527020 TRAV13-1A0A0B4J241 112 aa12.43□□□□□ -0.42
USH1C-205ENST00000527020 TRBV6-4A0A1B0GX49 114 aa12.43□□□□□ -0.42
USH1C-205ENST00000527020 NPC2P61916 151 aa12.43□□□□□ -0.42
USH1C-205ENST00000527020 FOXI1Q12951 378 aa12.43□□□□□ -0.42
USH1C-205ENST00000527020 HIVEP2P31629 2446 aa12.43□□□□□ -0.42
USH1C-205ENST00000527020 SMIM1B2RUZ4 78 aa12.43□□□□□ -0.42
USH1C-205ENST00000527020 F5H768 121 aa12.42□□□□□ -0.42
USH1C-205ENST00000527020 DAND5Q8N907 189 aa12.42□□□□□ -0.42
USH1C-205ENST00000527020 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
USH1C-205ENST00000527020 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
USH1C-205ENST00000527020 LINC00482Q8N8I6 264 aa12.41□□□□□ -0.42
USH1C-205ENST00000527020 SPATA25Q9BR10 227 aa12.41□□□□□ -0.42
USH1C-205ENST00000527020 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
USH1C-205ENST00000527020 CIDEAO60543 219 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 FHL2Q14192 279 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 Q1RN00 199 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 RNF183Q96D59 192 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 CARD19Q96LW7 228 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 Q9H8V8 135 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 VWFP04275 2813 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 TRIAP1O43715 76 aa12.4□□□□□ -0.42
USH1C-205ENST00000527020 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
USH1C-205ENST00000527020 TEN1Q86WV5 123 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms