RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZNF625Q96I27 306 aaPredicted RBP7.34□□□□□ -1.23
USP35-201ENST00000526425 SUMO2P61956 95 aaKnown RBP7.34□□□□□ -1.23
USP35-201ENST00000526425 Q6ZSV7 163 aa7.34□□□□□ -1.23
USP35-201ENST00000526425 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
USP35-201ENST00000526425 ZFAND2AQ8N6M9 145 aa7.34□□□□□ -1.23
USP35-201ENST00000526425 IGHV3-53P01767 116 aa7.34□□□□□ -1.24
USP35-201ENST00000526425 UBE2D1P51668 147 aa7.34□□□□□ -1.24
USP35-201ENST00000526425 RPS28P62857 69 aaKnown RBP7.34□□□□□ -1.24
USP35-201ENST00000526425 Q5XG85 94 aa7.34□□□□□ -1.24
USP35-201ENST00000526425 Q6YL49 198 aa7.34□□□□□ -1.24
USP35-201ENST00000526425 TMEM86BQ8N661 226 aa7.34□□□□□ -1.24
USP35-201ENST00000526425 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 LINC01561Q8N1V8 128 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 RNF185Q96GF1 192 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 MXRA5Q9NR99 2828 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 TMEM258P61165 79 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 Q8N8P6 123 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 U3KQE9 123 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 CSMD2Q7Z408 3487 aa7.33□□□□□ -1.24
USP35-201ENST00000526425 ATOX1O00244 68 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 SMIM2Q9BVW6 85 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
USP35-201ENST00000526425 A0A096LNT2 108 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 LINC01619G3V211 115 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 TRIAP1O43715 76 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 PSMB8P28062 276 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 TMEM61Q8N0U2 210 aa7.32□□□□□ -1.24
USP35-201ENST00000526425 MRPL53Q96EL3 112 aaKnown RBP7.32□□□□□ -1.24
USP35-201ENST00000526425 H7C423 109 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 DGAT2L7PQ6IED9 249 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 GPHB5Q86YW7 130 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 STHQ8IWL8 128 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 APCP25054 2843 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 IGLV1-40P01703 118 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 SS18Q15532 418 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 RNASE13Q5GAN3 156 aaKnown RBP7.31□□□□□ -1.24
USP35-201ENST00000526425 TP53TG1Q9Y2A0 90 aa7.31□□□□□ -1.24
USP35-201ENST00000526425 IGHV1OR15-1A0A075B7D0 117 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 LINC00482Q8N8I6 264 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 ATRQ13535 2644 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
USP35-201ENST00000526425 CFHR3Q02985 330 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 A0A0J9YY99 117 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 LINC00643Q86TS7 51 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
USP35-201ENST00000526425 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
USP35-201ENST00000526425 ZNF702PQ9H963 129 aa7.29□□□□□ -1.24
USP35-201ENST00000526425 TEP1Q99973 2627 aaKnown RBP7.29□□□□□ -1.24
USP35-201ENST00000526425 ZMAT4Q9H898 229 aa7.29□□□□□ -1.24
USP35-201ENST00000526425 TRAV23DV6A0A075B6W5 121 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 A0A0J9YX75 114 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 SBSPONQ8IVN8 264 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 SMR3AQ99954 134 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 DNAJC9-AS1A6NH13 148 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 PF4P02776 101 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 P0DMU3 169 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 FAM231AP0DMU4 169 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 FAM231CP0DMU5 169 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 CRYGAP11844 174 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 SUMO4Q6EEV6 95 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 LENEPQ9Y5L5 61 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 TRBV7-7A0A0K0K1E9 115 aa7.28□□□□□ -1.24
USP35-201ENST00000526425 OPRPNQ99935 248 aaPredicted RBP7.28□□□□□ -1.24
USP35-201ENST00000526425 K7EMT4 169 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 DNAL4O96015 105 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 RNASE3P12724 160 aaKnown RBP7.27□□□□□ -1.25
USP35-201ENST00000526425 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 DCANP1Q8TF63 244 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 C9orf85Q96MD7 179 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 C11orf86A6NJI1 115 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 DAND5Q8N907 189 aa7.27□□□□□ -1.25
USP35-201ENST00000526425 IGHV3-30P01768 117 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 IGHV3-30-5P0DP03 117 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 CD28P10747 220 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 DAZ4Q86SG3 579 aaKnown RBP7.26□□□□□ -1.25
USP35-201ENST00000526425 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 K7EQG2 157 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 RNASE1P07998 156 aaKnown RBP7.26□□□□□ -1.25
USP35-201ENST00000526425 TMEM89A2RUT3 159 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 CCL24O00175 119 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 VCYO14598 125 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 PROK1P58294 105 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 NBEAL2Q6ZNJ1 2754 aa7.26□□□□□ -1.25
USP35-201ENST00000526425 TRAV12-1A0A0B4J245 112 aa7.25□□□□□ -1.25
USP35-201ENST00000526425 A0A0B4J2C4 111 aa7.25□□□□□ -1.25
USP35-201ENST00000526425 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
USP35-201ENST00000526425 SETXQ7Z333 2677 aaKnown RBP7.25□□□□□ -1.25
USP35-201ENST00000526425 NXPH4O95158 308 aa7.25□□□□□ -1.25
USP35-201ENST00000526425 PPP1R17O96001 155 aa7.25□□□□□ -1.25
USP35-201ENST00000526425 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
USP35-201ENST00000526425 NRACQ8N912 160 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms