RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	XG	P55808	180 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	TMEM95	Q3KNT9	176 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	WFDC9	Q8NEX5	89 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	FAM104A	Q969W3	186 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	KIR2DL4	Q99706	377 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	PRO1854	Q9UHT4	67 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	NACA	E9PAV3	2078 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033		A0A087WWL8	130 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033		A8MWV9	139 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033		K7EQG2	157 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	IGHV3-11	P01762	117 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	ID1	P41134	155 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	EMP1	P54849	157 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	CKS1B	P61024	79 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	FAM159A	Q6UWV7	190 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRPT1	Q86TN4	253 aa	Known RBP	5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	ANKRD29	Q8N6D5	301 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	C20orf203	Q8NBC4	194 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	MRAP	Q8TCY5	172 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	PTH2	Q96A98	100 aa		5.7	□□□□□ -1.5
SPIDR-223	ENST00000524033	IGLV4-3	A0A075B6K6	122 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	LOC107984156	A0A0G2JMH3	177 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	RHOD	O00212	210 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	ZNF688	P0C7X2	276 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	LGALS3	P17931	250 aa	Known RBP	5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	KHDC1L	Q5JSQ8	128 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	TMEM170B	Q5T4T1	132 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	ARL17A	Q8IVW1	177 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	LITAF	Q99732	161 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	PYGO1	Q9Y3Y4	419 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	TENM3	Q9P273	2699 aa		5.69	□□□□□ -1.5
SPIDR-223	ENST00000524033	IGHV1OR15-1	A0A075B7D0	117 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRAV12-3	A0A0B4J271	114 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033		A4D1N5	150 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033	SPINK8	P0C7L1	97 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033	SPANXD	Q9BXN6	97 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033	SPANXC	Q9NY87	97 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033	WNK1	Q9H4A3	2382 aa		5.68	□□□□□ -1.5
SPIDR-223	ENST00000524033	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033		A0A0J9YXY3	114 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRBV30	A0A0K0K1B3	111 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	SLC25A20	O43772	301 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	PSMB8	P28062	276 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	RPL13A	P40429	203 aa	Known RBP	5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	MRPS36	P82909	103 aa	Known RBP	5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	ZNF56	Q15929	161 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	DEFB121	Q5J5C9	76 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	C10orf99	Q6UWK7	81 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	OPRPN	Q99935	248 aa	Predicted RBP	5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	C1orf43	Q9BWL3	253 aa		5.67	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRGV11	A0A075B6L2	103 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033		A0A0J9YXV3	536 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	TMEM262	E9PQX1	116 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033		F5H697	171 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033		I3L3M4	83 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	LINC01620	Q4KN68	170 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	PIK3CD-AS1	Q5SR53	167 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	SFTA2	Q6UW10	78 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	MUSTN1	Q8IVN3	82 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	RNF183	Q96D59	192 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	GEMIN7	Q9H840	131 aa	Known RBP	5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	ERG28	Q9UKR5	140 aa		5.66	□□□□□ -1.5
SPIDR-223	ENST00000524033	IGKV3-7	A0A075B6H7	116 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRAV26-1	A0A087WT03	109 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033		C9JAW5	83 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	ELANE	P08246	267 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	RBMY1A1	P0DJD3	496 aa	Known RBP	5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	RBMY1C	P0DJD4	496 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	IGHV3-30-3	P0DP02	117 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	KRTAP10-11	P60412	298 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	RBMY1F	Q15415	496 aa	Known RBP	5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033		Q6Q795	121 aa		5.65	□□□□□ -1.5
SPIDR-223	ENST00000524033	TRAV2	A0A0B4J234	112 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	TRBV10-2	A0A0K0K1G8	114 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033		K7EIL1	84 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	TRIAP1	O43715	76 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	TIMM17B	O60830	172 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	HOXD3	P31249	432 aa	Predicted RBP	5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	ATXN8	Q156A1	80 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	FAM74A4	Q5TZK3	123 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	DEFB104A	Q8WTQ1	72 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	CHCHD7	Q9BUK0	85 aa		5.64	□□□□□ -1.51
SPIDR-223	ENST00000524033	TRAV12-2	A0A075B6T6	113 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	IGLV5-45	A0A087WSX0	123 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	IGHV1-58	A0A0C4DH39	117 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	TINCR	A0A1B0GVN0	87 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	SNRPD3	P62318	126 aa	Known RBP	5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	EGFEM1P	Q0D2K5	195 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	MIA	Q16674	131 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	SPINK13	Q1W4C9	94 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	LINC00467	Q9BRT7	94 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	SPANXA1	Q9NS26	97 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	RYR3	Q15413	4870 aa		5.63	□□□□□ -1.51
SPIDR-223	ENST00000524033	RBMY1B	A6NDE4	496 aa	Known RBP	5.62	□□□□□ -1.51
SPIDR-223	ENST00000524033	RBMY1E	A6NEQ0	496 aa	Known RBP	5.62	□□□□□ -1.51
SPIDR-223	ENST00000524033		H3BT86	120 aa		5.62	□□□□□ -1.51
SPIDR-223	ENST00000524033	CCL24	O00175	119 aa		5.62	□□□□□ -1.51
SPIDR-223	ENST00000524033	RBMY1D	P0C7P1	496 aa	Known RBP	5.62	□□□□□ -1.51
SPIDR-223	ENST00000524033	NHLRC4	P0CG21	123 aa	Predicted RBP	5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms