RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
CTNNA1-230ENST00000521724 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-230ENST00000521724 MDFIQ99750 246 aa7.02□□□□□ -1.29
CTNNA1-230ENST00000521724 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
CTNNA1-230ENST00000521724 CSMD2Q7Z408 3487 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 H3BS24 57 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 NDUFA1O15239 70 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 GYPEP15421 78 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 FBXL19-AS1Q494R0 122 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 UTP20O75691 2785 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-230ENST00000521724 TMEM258P61165 79 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
CTNNA1-230ENST00000521724 KIR2DL5BQ8NHK3 375 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 Q9H8V8 135 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 DOPEY2Q9Y3R5 2298 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 IGHV1OR15-1A0A075B7D0 117 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 IGHV3OR16-10A0A075B7F0 116 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 CRYBG3Q68DQ2 2970 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 CELSR2Q9HCU4 2923 aa7□□□□□ -1.29
CTNNA1-230ENST00000521724 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 DNAL4O96015 105 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 FAM222AQ5U5X8 452 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 C22orf24Q9Y442 160 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 SPG11Q96JI7 2443 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 ABCA2Q9BZC7 2435 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 SPINK13Q1W4C9 94 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 Q9HAA7 133 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 IGHG2P01859 326 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 HTN1P15515 57 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 PROK1P58294 105 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 DSCR8Q96T75 97 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 MOB4Q9Y3A3 225 aa6.99□□□□□ -1.29
CTNNA1-230ENST00000521724 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.98□□□□□ -1.291e-6■■■□□ 18
CTNNA1-230ENST00000521724 A0A0A0MQY5 61 aa6.98□□□□□ -1.29
CTNNA1-230ENST00000521724 C6orf226Q5I0X4 101 aa6.98□□□□□ -1.29
CTNNA1-230ENST00000521724 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
CTNNA1-230ENST00000521724 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
CTNNA1-230ENST00000521724 PRIMA1Q86XR5 153 aa6.98□□□□□ -1.29
CTNNA1-230ENST00000521724 USMG5Q96IX5 58 aa6.98□□□□□ -1.29
CTNNA1-230ENST00000521724 HOXD3P31249 432 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-230ENST00000521724 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
CTNNA1-230ENST00000521724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-230ENST00000521724 Q9UF83 564 aa6.97□□□□□ -1.29
CTNNA1-230ENST00000521724 A0A087WVE0 104 aa6.96□□□□□ -1.29
CTNNA1-230ENST00000521724 C4orf26Q17RF5 130 aa6.96□□□□□ -1.29
CTNNA1-230ENST00000521724 LINC00467Q9BRT7 94 aa6.96□□□□□ -1.29
CTNNA1-230ENST00000521724 CFAP46Q8IYW2 2715 aa6.96□□□□□ -1.29
CTNNA1-230ENST00000521724 CSPG4Q6UVK1 2322 aa6.96□□□□□ -1.3
CTNNA1-230ENST00000521724 KNCNA6PVL3 124 aa6.96□□□□□ -1.3
CTNNA1-230ENST00000521724 SNRPD3P62318 126 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-230ENST00000521724 C14orf132Q9NPU4 83 aa6.96□□□□□ -1.3
CTNNA1-230ENST00000521724 FLNCQ14315 2725 aa6.96□□□□□ -1.3
CTNNA1-230ENST00000521724 COX6A2Q02221 97 aa6.95□□□□□ -1.3
CTNNA1-230ENST00000521724 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
CTNNA1-230ENST00000521724 IGHV3-38A0A0C4DH36 116 aa6.95□□□□□ -1.3
CTNNA1-230ENST00000521724 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
CTNNA1-230ENST00000521724 BPESC1Q9GZL8 116 aa6.95□□□□□ -1.3
CTNNA1-230ENST00000521724 PKD1L2Q7Z442 2459 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 OXTP01178 125 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 LMO4P61968 165 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 PIK3CD-AS1Q5SR53 167 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 HRCT1Q6UXD1 115 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 IGLV5-39A0A0G2JS06 123 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 F5H768 121 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 SYNJ2BPP57105 145 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 ZNF415Q09FC8 603 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 Q6JHZ5 121 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 CREBBPQ92793 2442 aa6.94□□□□□ -1.3
CTNNA1-230ENST00000521724 PLA2G2DQ9UNK4 145 aa6.93□□□□□ -1.3
CTNNA1-230ENST00000521724 CENPEQ02224 2701 aa6.93□□□□□ -1.3
CTNNA1-230ENST00000521724 C9orf129Q5T035 196 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-230ENST00000521724 BRD3OSQ6XYD6 125 aa6.93□□□□□ -1.3
CTNNA1-230ENST00000521724 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
CTNNA1-230ENST00000521724 TRAV13-2A0A0B4J235 113 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 H3BUA1 57 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 K7EMT4 169 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 CRPP02741 224 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 RPL28P46779 137 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 LY6EQ16553 131 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 Q6ZSN1 163 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 IGHV3OR16-12A0A075B7B8 117 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 Q5XG85 94 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 OVOL2Q9BRP0 275 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 PRORYQ9H606 182 aa6.92□□□□□ -1.3
CTNNA1-230ENST00000521724 A0A087WYN8 130 aa6.91□□□□□ -1.3
CTNNA1-230ENST00000521724 C19orf84I3L1E1 186 aa6.91□□□□□ -1.3
CTNNA1-230ENST00000521724 ZFYVE26Q68DK2 2539 aa6.91□□□□□ -1.3
CTNNA1-230ENST00000521724 PRM2P04554 102 aa6.9□□□□□ -1.3
CTNNA1-230ENST00000521724 UCNP55089 124 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms