RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CITED2Q99967 270 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-223ENST00000520520 TNFRSF18Q9Y5U5 241 aa6.34□□□□□ -1.39
CTNNA1-223ENST00000520520 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 SPRY2O43597 315 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 CFC1BP0CG36 223 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 CFC1P0CG37 223 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 ZNF22P17026 224 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 EMP1P54849 157 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 SPINK13Q1W4C9 94 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 TMEM95Q3KNT9 176 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 RAX2Q96IS3 184 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 UBE2E2Q96LR5 201 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 ZNF702PQ9H963 129 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 PEMTQ9UBM1 199 aa6.33□□□□□ -1.4
CTNNA1-223ENST00000520520 TCL1BO95988 128 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 COX6CP09669 75 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 KHDC1LQ5JSQ8 128 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 AMELXQ99217 191 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 LINC00467Q9BRT7 94 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 SPANXDQ9BXN6 97 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 JPT2Q9H910 190 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 SPANXCQ9NY87 97 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 DNAH3Q8TD57 4116 aa6.32□□□□□ -1.4
CTNNA1-223ENST00000520520 TRAV12-2A0A075B6T6 113 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 A4D1N5 150 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 A8MTW9 85 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 K7EIL1 84 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 SLC25A20O43772 301 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 TIMM17BO60830 172 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 IGKV3-20P01619 116 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 IFITM1P13164 125 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 SYNJ2BPP57105 145 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 CKS1BP61024 79 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 MRPS36P82909 103 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 TMEM263Q8WUH6 116 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 RNF183Q96D59 192 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 SPXQ9BT56 116 aa6.31□□□□□ -1.4
CTNNA1-223ENST00000520520 IGHV1-58A0A0C4DH39 117 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 INSP01308 110 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 HOXD3P31249 432 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 MIAQ16674 131 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 Q6ZUT4 128 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 ANKRD29Q8N6D5 301 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 LINC01600Q96MT4 127 aa6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 GEMIN7Q9H840 131 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-223ENST00000520520 COL7A1Q02388 2944 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 A0A0J9YXV3 536 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 TRBV30A0A0K0K1B3 111 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 C9JAW5 83 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 H3BT86 120 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 IGHV3-30-3P0DP02 117 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 DYNLRB2Q8TF09 96 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 NOTCH3Q9UM47 2321 aa6.29□□□□□ -1.4
CTNNA1-223ENST00000520520 KRTAP10-11P60412 298 aa6.28□□□□□ -1.4
CTNNA1-223ENST00000520520 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
CTNNA1-223ENST00000520520 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
CTNNA1-223ENST00000520520 MUSTN1Q8IVN3 82 aa6.28□□□□□ -1.4
CTNNA1-223ENST00000520520 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
CTNNA1-223ENST00000520520 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
CTNNA1-223ENST00000520520 DNAH9Q9NYC9 4486 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 TRBV10-2A0A0K0K1G8 114 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 H3BMM0 161 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 SNCGO76070 127 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 EDN2P20800 178 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 INSL3P51460 131 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 ZFAND6Q6FIF0 208 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 C10orf99Q6UWK7 81 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
CTNNA1-223ENST00000520520 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 TRAV8-4A0A0B4J246 113 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 H7C2G1 150 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 NDUFA1O15239 70 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 IGHV3-53P01767 116 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 TIRAPP58753 221 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 DEFB131AP59861 70 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 HERVK_113P63121 156 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 DGAT2L7PQ6IED9 249 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 Q8N2B8 174 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 C4orf3Q8WVX3 66 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 WWC2-AS2Q96NR7 200 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 UBE2D4Q9Y2X8 147 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 AGRNO00468 2067 aa6.26□□□□□ -1.41
CTNNA1-223ENST00000520520 MUC4Q99102 2169 aa6.25□□□□□ -1.41
CTNNA1-223ENST00000520520 TRAV25A0A0B4J276 109 aa6.25□□□□□ -1.41
CTNNA1-223ENST00000520520 RS1O15537 224 aa6.25□□□□□ -1.41
CTNNA1-223ENST00000520520 PRSS2P07478 247 aa6.25□□□□□ -1.41
CTNNA1-223ENST00000520520 CMC4P56277 68 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms