RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 H7C1H1 209 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 J3QLI3 93 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 ENSAO43768 121 aaKnown RBP1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 ZNF22P17026 224 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 CNTFRP26992 372 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 TSPEAR-AS2P59090 65 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 LINC00315P59091 139 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMEM258P61165 79 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 ERCC8Q13216 396 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 C4orf26Q17RF5 130 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 C10orf55Q5SWW7 151 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMEM170BQ5T4T1 132 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 MINOS1Q5TGZ0 78 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 HCP5Q6MZN7 132 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 C3orf56Q8N813 242 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 OR13C6PQ8NH95 151 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 TOMM6Q96B49 74 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM19A4Q96LR4 140 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 METTL26Q96S19 204 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 PRO1854Q9UHT4 67 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 MINOS1-NBL1R4GNA1 71 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 PTPRQQ9UMZ3 2332 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 BDP1A6H8Y1 2624 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMSB15BA0A087X1C1 80 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRAV8-2A0A0B4J237 113 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRAV8-4A0A0B4J246 113 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 LOC107984156A0A0G2JMH3 177 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM236AA0A1B0GUQ0 79 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM236BA0A1B0GV22 79 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 NCBP2LA6PVI3 153 aaKnown RBP1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 LST1O00453 97 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 SH2D1AO60880 128 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 ACYP1P07311 99 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 CTSGP08311 255 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 PSMB8P28062 276 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 CKS2P33552 79 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 ZNF80P51504 273 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 PLGLAQ15195 96 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 C9orf153Q5TBE3 101 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 GOLT1AQ6ZVE7 132 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 PRNTQ86SH4 94 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 LINC00643Q86TS7 51 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 ARL17AQ8IVW1 177 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 EXOC3-AS1Q8N2X6 119 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMEM86BQ8N661 226 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 EDA2RQ9HAV5 297 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 DYNLRB1Q9NP97 96 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 PRO0628Q9UI54 55 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 ABCA4P78363 2273 aa1.97□□□□□ -2.09
HMGB1P41-201ENST00000520234 DMDP11532 3685 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRBV7-1A0A0A6YYK4 115 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHV3-72A0A0B4J1Y9 119 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHV7-4-1A0A0J9YVY3 117 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGIPA6NJ69 53 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 C11orf86A6NJI1 115 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 ZNF815PA8K554 130 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 NDUFC2-KCTD14E9PQ53 114 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 H3BMM0 161 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 UBE2AP49459 152 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 UBE2E1P51965 193 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 PMVKQ15126 192 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 ATXN8Q156A1 80 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 DEFB116Q30KQ4 102 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 LINC00336Q6ZUF6 198 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 DAND5Q8N907 189 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 UBE2WQ96B02 151 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 LINC00477Q96M19 166 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 SMIM2Q9BVW6 85 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 PRORYQ9H606 182 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 TIMM8BQ9Y5J9 83 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 LENEPQ9Y5L5 61 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 PRUNE2Q8WUY3 3088 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 CFAP54Q96N23 3096 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 MYO15AQ9UKN7 3530 aa1.96□□□□□ -2.1
HMGB1P41-201ENST00000520234 CUL9Q8IWT3 2517 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 OTOGLQ3ZCN5 2332 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 TINCRA0A1B0GVN0 87 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 hADV29S1A0JD25 119 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 PLAC8L1A1L4L8 177 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 CLPSL1A2RUU4 121 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 LYNX1G3V0Z9 82 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 M0R3E3 92 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRGV3P03979 118 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 LYNX1P0DP58 116 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 SEC61GP60059 68 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 REG3AQ06141 175 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 ZNF56Q15929 161 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 C6orf226Q5I0X4 101 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 FAM222AQ5U5X8 452 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 SFTA2Q6UW10 78 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 HRCT1Q6UXD1 115 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 VMO1Q7Z5L0 202 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 GPHB5Q86YW7 130 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 DYNAPQ8N1N2 210 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 LINC01560Q8TB33 94 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 OBSCN-AS1Q96MR7 158 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 SLC50A1Q9BRV3 221 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 TIMM21Q9BVV7 248 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms