RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 HERVK_113P63121 156 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 TMEM86BQ8N661 226 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 CDKN2A-AS1Q9UH64 79 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 TRBV10-1A0A0K0K1A3 114 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 ODF3L2Q3SX64 289 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.79□□□□□ -1.64
CDH12-203ENST00000517378 TMEM101Q96IK0 257 aa4.79□□□□□ -1.64
CDH12-203ENST00000517378 ABCA12Q86UK0 2595 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 A8MZ25 164 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 LST1O00453 97 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 COX6CP09669 75 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 DEFB121Q5J5C9 76 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 NTN5Q8WTR8 489 aaPredicted RBP4.78□□□□□ -1.64
CDH12-203ENST00000517378 PTPN13Q12923 2485 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 IGHV3-38A0A0C4DH36 116 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 H7C423 109 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 PRSS2P07478 247 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 LINC00242Q5T6M2 205 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 CSPG4Q6UVK1 2322 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 SPG11Q96JI7 2443 aa4.78□□□□□ -1.64
CDH12-203ENST00000517378 DAZ2Q13117 558 aaKnown RBP4.78□□□□□ -1.65
CDH12-203ENST00000517378 DEFB113Q30KQ7 82 aa4.78□□□□□ -1.65
CDH12-203ENST00000517378 DAZ4Q86SG3 579 aaKnown RBP4.78□□□□□ -1.65
CDH12-203ENST00000517378 UBE2WQ96B02 151 aa4.78□□□□□ -1.65
CDH12-203ENST00000517378 DAZ3Q9NR90 486 aaKnown RBP4.78□□□□□ -1.65
CDH12-203ENST00000517378 FAM240AA0A1B0GVK7 77 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 SMIM1B2RUZ4 78 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 K7EQD1 137 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 COX6A2Q02221 97 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 Q6Q795 121 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 CITED2Q99967 270 aaPredicted RBP4.77□□□□□ -1.65
CDH12-203ENST00000517378 TRAV4A0A0B4J268 109 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 TEX49A0A1B0GTD5 131 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
CDH12-203ENST00000517378 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
CDH12-203ENST00000517378 ZNF625Q96I27 306 aaPredicted RBP4.77□□□□□ -1.65
CDH12-203ENST00000517378 ZNF469Q96JG9 3925 aaPredicted RBP4.76□□□□□ -1.65
CDH12-203ENST00000517378 ITPR2Q14571 2701 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 F5H768 121 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 LINC00694P0DN24 101 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 MRPL23Q16540 153 aaKnown RBP4.76□□□□□ -1.65
CDH12-203ENST00000517378 C2orf82Q6UX34 121 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 NTM-AS1Q6ZSK4 140 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 Q6ZSV7 163 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 KRTAP1-3Q8IUG1 177 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 CUBNO60494 3623 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 KMT2BQ9UMN6 2715 aaPredicted RBP4.76□□□□□ -1.65
CDH12-203ENST00000517378 RPL36AP83881 106 aaKnown RBP4.76□□□□□ -1.65
CDH12-203ENST00000517378 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 STHQ8IWL8 128 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
CDH12-203ENST00000517378 Q9H8V8 135 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 XCL2Q9UBD3 114 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 SORL1Q92673 2214 aa4.76□□□□□ -1.65
CDH12-203ENST00000517378 FBN2P35556 2912 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 TRAV8-4A0A0B4J246 113 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 HERV-K104P63124 156 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 SHISA2Q6UWI4 295 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 CLEC2BQ92478 149 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 CDC42SE2Q9NRR3 84 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 KRTAP10-9P60411 292 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 NPC2P61916 151 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 KHDC1LQ5JSQ8 128 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 TEX29Q8N6K0 151 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 FAM110AQ9BQ89 295 aa4.75□□□□□ -1.65
CDH12-203ENST00000517378 COX7A2LO14548 114 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 SNCGO76070 127 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 DAND5Q8N907 189 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 Q96MF0 132 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 ANKRD17O75179 2603 aaKnown RBP4.74□□□□□ -1.65
CDH12-203ENST00000517378 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 SOSTDC1Q6X4U4 206 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 Q6ZTI0 123 aa4.74□□□□□ -1.65
CDH12-203ENST00000517378 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 CRLF1O75462 422 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 GIG44P09565 113 aaPredicted RBP4.73□□□□□ -1.65
CDH12-203ENST00000517378 CMC4P56277 68 aaPredicted RBP4.73□□□□□ -1.65
CDH12-203ENST00000517378 USP9YO00507 2555 aaPredicted RBP4.73□□□□□ -1.65
CDH12-203ENST00000517378 CCL24O00175 119 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 TRBV6-4A0A1B0GX49 114 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 NDUFA7O95182 113 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
CDH12-203ENST00000517378 GAGE2BQ13066 116 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 GAGE2EQ4V326 116 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 FAM222AQ5U5X8 452 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 TMEM243Q9BU79 118 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 GAGE2DQ9UEU5 116 aa4.73□□□□□ -1.65
CDH12-203ENST00000517378 ZANQ9Y493 2812 aa4.72□□□□□ -1.65
CDH12-203ENST00000517378 TRAV13-1A0A0B4J241 112 aa4.72□□□□□ -1.65
CDH12-203ENST00000517378 TRACP01848 142 aa4.72□□□□□ -1.65
CDH12-203ENST00000517378 NDUFV3P56181 108 aaKnown RBP4.72□□□□□ -1.65
CDH12-203ENST00000517378 OVOL2Q9BRP0 275 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms