RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 STOML2Q9UJZ1 356 aa-3.67□□□□□ -3
RNU4-71P-201ENST00000516258 HLA-DRB4X5D2U9 266 aa-3.67□□□□□ -3
RNU4-71P-201ENST00000516258 ZCCHC11Q5TAX3 1644 aaKnown RBP-3.67□□□□□ -3
RNU4-71P-201ENST00000516258 ERCC6Q03468 1493 aa-3.67□□□□□ -3
RNU4-71P-201ENST00000516258 MYH13Q9UKX3 1938 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 TRBV7-4A0A0J9YYF1 115 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 IFNA17P01571 189 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 TCTAP57738 103 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 COX17Q14061 63 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 AMELXQ99217 191 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 LSM2Q9Y333 95 aaKnown RBP-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 CHD7Q9P2D1 2997 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 DNAH8Q96JB1 4490 aa-3.68□□□□□ -3
RNU4-71P-201ENST00000516258 LINC00959A0A1B0GUT2 108 aa-3.69□□□□□ -3
RNU4-71P-201ENST00000516258 NIPSNAP2O75323 286 aa-3.69□□□□□ -3
RNU4-71P-201ENST00000516258 SPANXN1Q5VSR9 72 aa-3.69□□□□□ -3
RNU4-71P-201ENST00000516258 STX12Q86Y82 276 aa-3.69□□□□□ -3
RNU4-71P-201ENST00000516258 VSTM2AQ8TAG5 236 aa-3.69□□□□□ -3
RNU4-71P-201ENST00000516258 ARHGEF12Q9NZN5 1544 aa-3.7□□□□□ -3
RNU4-71P-201ENST00000516258 PXDNQ92626 1479 aa-3.7□□□□□ -3
RNU4-71P-201ENST00000516258 YPEL1O60688 119 aa-3.7□□□□□ -3
RNU4-71P-201ENST00000516258 PIPP12273 146 aaPredicted RBP-3.7□□□□□ -3
RNU4-71P-201ENST00000516258 RPL7L1Q6DKI1 246 aaKnown RBP-3.7□□□□□ -3
RNU4-71P-201ENST00000516258 SPTSSBQ8NFR3 76 aa-3.7□□□□□ -3
RNU4-71P-201ENST00000516258 KIF21AQ7Z4S6 1674 aa-3.71□□□□□ -3
RNU4-71P-201ENST00000516258 A0A1W2PRE2 83 aa-3.71□□□□□ -3
RNU4-71P-201ENST00000516258 FAM107AO95990 144 aa-3.71□□□□□ -3
RNU4-71P-201ENST00000516258 CCDC115Q96NT0 180 aa-3.71□□□□□ -3
RNU4-71P-201ENST00000516258 A6NIN4 97 aa-3.72□□□□□ -3
RNU4-71P-201ENST00000516258 MT-ND4LP03901 98 aa-3.72□□□□□ -3
RNU4-71P-201ENST00000516258 TMEM78Q5T7P6 136 aa-3.72□□□□□ -3
RNU4-71P-201ENST00000516258 Q6AWC8 147 aa-3.72□□□□□ -3
RNU4-71P-201ENST00000516258 USMG5Q96IX5 58 aa-3.73□□□□□ -3.01
RNU4-71P-201ENST00000516258 BANF2Q9H503 90 aa-3.73□□□□□ -3.01
RNU4-71P-201ENST00000516258 SMIM24O75264 130 aa-3.74□□□□□ -3.01
RNU4-71P-201ENST00000516258 REEP5Q00765 189 aa-3.74□□□□□ -3.01
RNU4-71P-201ENST00000516258 CALML5Q9NZT1 146 aa-3.74□□□□□ -3.01
RNU4-71P-201ENST00000516258 ACACBO00763 2458 aa-3.76□□□□□ -3.01
RNU4-71P-201ENST00000516258 MYOM3Q5VTT5 1437 aa-3.76□□□□□ -3.01
RNU4-71P-201ENST00000516258 SERPINB1P30740 379 aa-3.76□□□□□ -3.01
RNU4-71P-201ENST00000516258 MIC13Q5XKP0 118 aa-3.76□□□□□ -3.01
RNU4-71P-201ENST00000516258 V9GYH0 126 aa-3.76□□□□□ -3.01
RNU4-71P-201ENST00000516258 NWD2Q9ULI1 1742 aa-3.76□□□□□ -3.01
RNU4-71P-201ENST00000516258 F8VRH5 84 aa-3.77□□□□□ -3.01
RNU4-71P-201ENST00000516258 PAEPP09466 180 aa-3.77□□□□□ -3.01
RNU4-71P-201ENST00000516258 CCL8P80075 99 aa-3.77□□□□□ -3.01
RNU4-71P-201ENST00000516258 TMEM244Q5VVB8 128 aa-3.77□□□□□ -3.01
RNU4-71P-201ENST00000516258 ARHGEF10O15013 1369 aa-3.77□□□□□ -3.01
RNU4-71P-201ENST00000516258 SRCAPQ6ZRS2 3230 aa-3.78□□□□□ -3.01
RNU4-71P-201ENST00000516258 BAGE2Q86Y30 109 aa-3.78□□□□□ -3.01
RNU4-71P-201ENST00000516258 ARPC5O15511 151 aa-3.79□□□□□ -3.02
RNU4-71P-201ENST00000516258 CFAP53Q96M91 514 aa-3.79□□□□□ -3.02
RNU4-71P-201ENST00000516258 MAGI1Q96QZ7 1491 aaPredicted RBP-3.79□□□□□ -3.02
RNU4-71P-201ENST00000516258 SETBP1Q9Y6X0 1596 aa-3.8□□□□□ -3.02
RNU4-71P-201ENST00000516258 UQCR11O14957 56 aa-3.8□□□□□ -3.02
RNU4-71P-201ENST00000516258 CBLN1P23435 193 aa-3.8□□□□□ -3.02
RNU4-71P-201ENST00000516258 NDUFA4L2Q9NRX3 87 aa-3.8□□□□□ -3.02
RNU4-71P-201ENST00000516258 OVOS2A0A0G2JMS6 1433 aa-3.8□□□□□ -3.02
RNU4-71P-201ENST00000516258 SYNMO15061 1565 aa-3.8□□□□□ -3.02
RNU4-71P-201ENST00000516258 DPM2O94777 84 aa-3.81□□□□□ -3.02
RNU4-71P-201ENST00000516258 DAPK1P53355 1430 aa-3.81□□□□□ -3.02
RNU4-71P-201ENST00000516258 SHANK2Q9UPX8 1470 aa-3.81□□□□□ -3.02
RNU4-71P-201ENST00000516258 COL6A5A8TX70 2615 aa-3.81□□□□□ -3.02
RNU4-71P-201ENST00000516258 PATJQ8NI35 1801 aa-3.81□□□□□ -3.02
RNU4-71P-201ENST00000516258 TRBV20-1A0A075B6N2 111 aa-3.82□□□□□ -3.02
RNU4-71P-201ENST00000516258 UBE2D3P61077 147 aa-3.82□□□□□ -3.02
RNU4-71P-201ENST00000516258 UBE2D2P62837 147 aa-3.82□□□□□ -3.02
RNU4-71P-201ENST00000516258 S100A7L2Q5SY68 101 aa-3.82□□□□□ -3.02
RNU4-71P-201ENST00000516258 CRIPTQ9P021 101 aa-3.82□□□□□ -3.02
RNU4-71P-201ENST00000516258 LENEPQ9Y5L5 61 aa-3.82□□□□□ -3.02
RNU4-71P-201ENST00000516258 SIX6O95475 246 aa-3.83□□□□□ -3.02
RNU4-71P-201ENST00000516258 MT1HL1P0DM35 61 aa-3.83□□□□□ -3.02
RNU4-71P-201ENST00000516258 MNS1Q8NEH6 495 aa-3.83□□□□□ -3.02
RNU4-71P-201ENST00000516258 HOPXQ9BPY8 73 aaPredicted RBP-3.83□□□□□ -3.02
RNU4-71P-201ENST00000516258 RANBP2P49792 3224 aaKnown RBP-3.83□□□□□ -3.02
RNU4-71P-201ENST00000516258 BTAF1O14981 1849 aa-3.84□□□□□ -3.02
RNU4-71P-201ENST00000516258 OR9Q1Q8NGQ5 310 aa-3.84□□□□□ -3.02
RNU4-71P-201ENST00000516258 BOLA2Q9H3K6 86 aa-3.84□□□□□ -3.02
RNU4-71P-201ENST00000516258 C9orf92A6NGG3 77 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 PFDN1O60925 122 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 APOC3P02656 99 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 C10orf128Q5T292 105 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 PPP1R2P3Q6NXS1 205 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 PARVGQ9HBI0 331 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 RAPGEF6Q8TEU7 1601 aa-3.85□□□□□ -3.03
RNU4-71P-201ENST00000516258 CSMD1Q96PZ7 3565 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 DISP2A7MBM2 1401 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 SSSCA1O60232 199 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 TPPP2P59282 170 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 MRPS25P82663 173 aaKnown RBP-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 C10orf113Q5VZT2 155 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 Q8N8P6 123 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 MRPL40Q9NQ50 206 aaKnown RBP-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 LINC01558Q9Y6Z2 57 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 SYNJ1O43426 1573 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 DOCK2Q92608 1830 aa-3.86□□□□□ -3.03
RNU4-71P-201ENST00000516258 EIF3AQ14152 1382 aaKnown RBP-3.87□□□□□ -3.03
RNU4-71P-201ENST00000516258 RIMS1Q86UR5 1692 aaKnown RBP-3.87□□□□□ -3.03
RNU4-71P-201ENST00000516258 MYH6P13533 1939 aa-3.87□□□□□ -3.03
RNU4-71P-201ENST00000516258 SPAARA0A1B0GVQ0 90 aa-3.87□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms