RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 G3V318 75 aa6.32□□□□□ -1.4
GPBP1-208ENST00000514387 DEFB109BQ30KR1 87 aa6.32□□□□□ -1.4
GPBP1-208ENST00000514387 LYNX1G3V0Z9 82 aa6.31□□□□□ -1.4
GPBP1-208ENST00000514387 LYNX1P0DP58 116 aa6.31□□□□□ -1.4
GPBP1-208ENST00000514387 ARRDC1-AS1Q9H2J1 176 aa6.31□□□□□ -1.4
GPBP1-208ENST00000514387 ORMDL1Q9P0S3 153 aa6.31□□□□□ -1.4
GPBP1-208ENST00000514387 RANBP2P49792 3224 aaKnown RBP6.31□□□□□ -1.4
GPBP1-208ENST00000514387 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
GPBP1-208ENST00000514387 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
GPBP1-208ENST00000514387 A0A087WVE0 104 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 LYRM9A8MSI8 78 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 PLA2G2CQ5R387 149 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 Q9HAA7 133 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 UBL5Q9BZL1 73 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 LINC00242Q5T6M2 205 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 LINC00467Q9BRT7 94 aa6.3□□□□□ -1.4
GPBP1-208ENST00000514387 AHCTF1Q8WYP5 2266 aa6.29□□□□□ -1.4
GPBP1-208ENST00000514387 IGHV3-53P01767 116 aa6.29□□□□□ -1.4
GPBP1-208ENST00000514387 C20orf197Q8N268 126 aa6.29□□□□□ -1.4
GPBP1-208ENST00000514387 Q6ZVQ6 151 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 H3BQ85 93 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 DEFB1P60022 68 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 TMEM256-PLSCR3K7ERE1 68 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 DEFB123Q8N688 67 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 SND1-IT1Q9HBX3 110 aa6.28□□□□□ -1.4
GPBP1-208ENST00000514387 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 A0A087WYN8 130 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 LY6G6DO95868 133 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 LINC00337Q8N6G1 96 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
GPBP1-208ENST00000514387 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
GPBP1-208ENST00000514387 A8MTW9 85 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 ERC2-IT1O76042 136 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 DAD1P61803 113 aa6.27□□□□□ -1.41
GPBP1-208ENST00000514387 LAMA2P24043 3122 aaKnown RBP6.26□□□□□ -1.41
GPBP1-208ENST00000514387 LAMA3Q16787 3333 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 ICE1Q9Y2F5 2266 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 COX6A2Q02221 97 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 FBXL19-AS1Q494R0 122 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
GPBP1-208ENST00000514387 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 NACAE9PAV3 2078 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 K7EQG2 157 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 FAM229BQ4G0N7 80 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
GPBP1-208ENST00000514387 USP34Q70CQ2 3546 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 CUL9Q8IWT3 2517 aa6.26□□□□□ -1.41
GPBP1-208ENST00000514387 REV3LO60673 3130 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 LECT2O14960 151 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 BLCAPP62952 87 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 ESRGQ1W209 222 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 PDE6GP18545 87 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 MIR7-3HGQ8N6C7 128 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 NCR3O14931 201 aa6.25□□□□□ -1.41
GPBP1-208ENST00000514387 LPAL2Q16609 132 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 BPESC1Q9GZL8 116 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 WDR87Q6ZQQ6 2873 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 ZNF318Q5VUA4 2279 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 TRBV10-1A0A0K0K1A3 114 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 ZNF73O43830 326 aaPredicted RBP6.24□□□□□ -1.41
GPBP1-208ENST00000514387 CXCL6P80162 114 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
GPBP1-208ENST00000514387 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
GPBP1-208ENST00000514387 C11orf71Q6IPW1 123 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 COX7B2Q8TF08 81 aa6.24□□□□□ -1.41
GPBP1-208ENST00000514387 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
GPBP1-208ENST00000514387 LOC110117498A0A087WWA1 95 aa6.23□□□□□ -1.41
GPBP1-208ENST00000514387 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
GPBP1-208ENST00000514387 RBM3P98179 157 aaKnown RBP6.23□□□□□ -1.41
GPBP1-208ENST00000514387 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
GPBP1-208ENST00000514387 ZFHX3Q15911 3703 aa6.23□□□□□ -1.41
GPBP1-208ENST00000514387 TTC28Q96AY4 2481 aa6.23□□□□□ -1.41
GPBP1-208ENST00000514387 URB1O60287 2271 aaKnown RBP6.23□□□□□ -1.41
GPBP1-208ENST00000514387 TRBV6-4A0A1B0GX49 114 aa6.23□□□□□ -1.41
GPBP1-208ENST00000514387 POLEQ07864 2286 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 MIFP14174 115 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 ZFP36P26651 326 aaKnown RBP6.22□□□□□ -1.41
GPBP1-208ENST00000514387 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 A6NN06 94 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 K7EQD1 137 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 NCOR1O75376 2440 aa6.22□□□□□ -1.41
GPBP1-208ENST00000514387 CCL18P55774 89 aa6.21□□□□□ -1.41
GPBP1-208ENST00000514387 IGKV3-7A0A075B6H7 116 aa6.21□□□□□ -1.42
GPBP1-208ENST00000514387 F8WEM9 126 aa6.21□□□□□ -1.42
GPBP1-208ENST00000514387 LCA10Q71F78 164 aa6.21□□□□□ -1.42
GPBP1-208ENST00000514387 UBE2BP63146 152 aa6.2□□□□□ -1.42
GPBP1-208ENST00000514387 Q8N814 137 aa6.2□□□□□ -1.42
GPBP1-208ENST00000514387 PROK1P58294 105 aa6.2□□□□□ -1.42
GPBP1-208ENST00000514387 LINC00158P58513 81 aa6.2□□□□□ -1.42
GPBP1-208ENST00000514387 TRBV7-4A0A0J9YYF1 115 aa6.19□□□□□ -1.42
GPBP1-208ENST00000514387 Q6ZTC4 211 aa6.19□□□□□ -1.42
GPBP1-208ENST00000514387 PTPRZ1P23471 2315 aaPredicted RBP6.19□□□□□ -1.42
GPBP1-208ENST00000514387 Q6ZSN1 163 aa6.19□□□□□ -1.42
GPBP1-208ENST00000514387 DIRC1Q969H9 104 aa6.19□□□□□ -1.42
GPBP1-208ENST00000514387 IGHV3-73A0A0B4J1V6 119 aa6.19□□□□□ -1.42
GPBP1-208ENST00000514387 UBE2L6O14933 153 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms