RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 DEFB121Q5J5C9 76 aa2.06□□□□□ -2.08
GYPA-205ENST00000508337 COA5Q86WW8 74 aa2.06□□□□□ -2.08
GYPA-205ENST00000508337 ABCC1P33527 1531 aa2.06□□□□□ -2.08
GYPA-205ENST00000508337 RGPD4Q7Z3J3 1758 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 KIAA1549LQ6ZVL6 1849 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 UNC13CQ8NB66 2214 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 IGLV3-32A0A0A0MS00 114 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 FXYD3Q14802 87 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 TXNDC17Q9BRA2 123 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 KDM6BO15054 1643 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 ADAMTS7Q9UKP4 1686 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 PPLO60437 1756 aa2.05□□□□□ -2.08
GYPA-205ENST00000508337 NBDYA0A0U1RRE5 68 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 COX8AP10176 69 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 GCHFRP30047 84 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 LINC00322Q6ZN03 302 aaPredicted RBP2.04□□□□□ -2.08
GYPA-205ENST00000508337 Q86TA4 180 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 BAGE2Q86Y30 109 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 MADDQ8WXG6 1647 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 GNG13Q9P2W3 67 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 LINC01558Q9Y6Z2 57 aa2.04□□□□□ -2.08
GYPA-205ENST00000508337 STRCQ7RTU9 1775 aa2.03□□□□□ -2.08
GYPA-205ENST00000508337 THOC2Q8NI27 1593 aaKnown RBP2.03□□□□□ -2.08
GYPA-205ENST00000508337 MRC1P22897 1456 aa2.03□□□□□ -2.08
GYPA-205ENST00000508337 ZFHX2Q9C0A1 2572 aaPredicted RBP2.03□□□□□ -2.08
GYPA-205ENST00000508337 IGKV2-40A0A087WW87 121 aaPredicted RBP2.03□□□□□ -2.08
GYPA-205ENST00000508337 IGKV2D-40P01614 121 aaPredicted RBP2.03□□□□□ -2.08
GYPA-205ENST00000508337 CCL18P55774 89 aa2.03□□□□□ -2.08
GYPA-205ENST00000508337 Q6JHZ5 121 aa2.03□□□□□ -2.08
GYPA-205ENST00000508337 SMIM5Q71RC9 77 aa2.03□□□□□ -2.08
GYPA-205ENST00000508337 C5orf56Q8N8D9 126 aa2.03□□□□□ -2.08
GYPA-205ENST00000508337 RGPD3A6NKT7 1758 aaPredicted RBP2.03□□□□□ -2.09
GYPA-205ENST00000508337 HMGXB3Q12766 1538 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 KCPQ6ZWJ8 1503 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 ESPL1Q14674 2120 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 ZGRF1Q86YA3 2104 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 MPDZO75970 2070 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 A0A087WVE0 104 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 BAGE3Q86Y29 109 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 PATJQ8NI35 1801 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 LAMB1P07942 1786 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 PEAK1Q9H792 1746 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 COL4A6Q14031 1691 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 BAZ2BQ9UIF8 2168 aaKnown RBP2.02□□□□□ -2.09
GYPA-205ENST00000508337 IQGAP3Q86VI3 1631 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 MROH1Q8NDA8 1641 aa2.02□□□□□ -2.09
GYPA-205ENST00000508337 ABCA10Q8WWZ4 1543 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 CASP8AP2Q9UKL3 1982 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 UQCR11O14957 56 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 C3orf79P0CE67 100 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 SPTBP11277 2137 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 IFI27P40305 119 aaPredicted RBP2.01□□□□□ -2.09
GYPA-205ENST00000508337 ZNF563Q8TA94 476 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 WFDC6Q9BQY6 131 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 TOP2BQ02880 1626 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 ABCA8O94911 1581 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 EFCAB5A4FU69 1503 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 KIAA0100Q14667 2235 aaKnown RBP2.01□□□□□ -2.09
GYPA-205ENST00000508337 KIF20BQ96Q89 1820 aa2.01□□□□□ -2.09
GYPA-205ENST00000508337 LAMB2P55268 1798 aa2□□□□□ -2.09
GYPA-205ENST00000508337 MED12LQ86YW9 2145 aa2□□□□□ -2.09
GYPA-205ENST00000508337 NWD2Q9ULI1 1742 aa2□□□□□ -2.09
GYPA-205ENST00000508337 CLTCQ00610 1675 aaKnown RBP2□□□□□ -2.09
GYPA-205ENST00000508337 SHROOM2Q13796 1616 aa2□□□□□ -2.09
GYPA-205ENST00000508337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2□□□□□ -2.09
GYPA-205ENST00000508337 A0A087WTM6 91 aa2□□□□□ -2.09
GYPA-205ENST00000508337 INE1O15225 51 aa2□□□□□ -2.09
GYPA-205ENST00000508337 S100A3P33764 101 aa2□□□□□ -2.09
GYPA-205ENST00000508337 DEFB132Q7Z7B7 95 aa2□□□□□ -2.09
GYPA-205ENST00000508337 DEFB107AQ8IZN7 70 aa2□□□□□ -2.09
GYPA-205ENST00000508337 AMELXQ99217 191 aa2□□□□□ -2.09
GYPA-205ENST00000508337 UBE2D4Q9Y2X8 147 aa2□□□□□ -2.09
GYPA-205ENST00000508337 CFAP74Q9C0B2 1584 aa2□□□□□ -2.09
GYPA-205ENST00000508337 INO80Q9ULG1 1556 aaPredicted RBP2□□□□□ -2.09
GYPA-205ENST00000508337 TANC1Q9C0D5 1861 aa2□□□□□ -2.09
GYPA-205ENST00000508337 TET3O43151 1660 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 KIF21AQ7Z4S6 1674 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 SPAG17Q6Q759 2223 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 PTPRDP23468 1912 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 MAP3K4Q9Y6R4 1608 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 SETBP1Q9Y6X0 1596 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 TRGV1A0A0A0MS02 117 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 Q6ZRN7 208 aaPredicted RBP1.99□□□□□ -2.09
GYPA-205ENST00000508337 ZNF625Q96I27 306 aaPredicted RBP1.99□□□□□ -2.09
GYPA-205ENST00000508337 FAM103A1Q9BTL3 118 aaKnown RBP1.99□□□□□ -2.09
GYPA-205ENST00000508337 PLXNA1Q9UIW2 1896 aa1.99□□□□□ -2.09
GYPA-205ENST00000508337 SCN11AQ9UI33 1791 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 EXPH5Q8NEV8 1989 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 EHBP1L1Q8N3D4 1523 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 MYO5CQ9NQX4 1742 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 MYH4Q9Y623 1939 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 TRAV1-2A0A0B4J238 106 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 M0R2N4 97 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 MGPP08493 103 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 ZNF137PP52743 207 aa1.98□□□□□ -2.09
GYPA-205ENST00000508337 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms