RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF664Q8N3J9 261 aa9.92□□□□□ -0.82
RNF4-210ENST00000508235 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
RNF4-210ENST00000508235 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
RNF4-210ENST00000508235 IGLV10-54A0A075B6I4 117 aa9.91□□□□□ -0.82
RNF4-210ENST00000508235 G0S2P27469 103 aa9.91□□□□□ -0.82
RNF4-210ENST00000508235 FABP9Q0Z7S8 132 aa9.91□□□□□ -0.82
RNF4-210ENST00000508235 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
RNF4-210ENST00000508235 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
RNF4-210ENST00000508235 IGLV5-52A0A0A0MRZ9 124 aa9.9□□□□□ -0.82
RNF4-210ENST00000508235 LECT2O14960 151 aa9.9□□□□□ -0.82
RNF4-210ENST00000508235 SS18Q15532 418 aa9.9□□□□□ -0.82
RNF4-210ENST00000508235 KRTAP26-1Q6PEX3 210 aa9.9□□□□□ -0.82
RNF4-210ENST00000508235 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.82
RNF4-210ENST00000508235 TRAPPC1Q9Y5R8 145 aa9.9□□□□□ -0.82
RNF4-210ENST00000508235 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
RNF4-210ENST00000508235 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
RNF4-210ENST00000508235 CCL25O15444 150 aa9.89□□□□□ -0.83
RNF4-210ENST00000508235 WFDC2Q14508 124 aa9.89□□□□□ -0.83
RNF4-210ENST00000508235 ALKBH7Q9BT30 221 aaPredicted RBP9.89□□□□□ -0.83
RNF4-210ENST00000508235 DNAH10Q8IVF4 4471 aa9.89□□□□□ -0.83
RNF4-210ENST00000508235 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
RNF4-210ENST00000508235 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
RNF4-210ENST00000508235 IFI27P40305 119 aaPredicted RBP9.88□□□□□ -0.83
RNF4-210ENST00000508235 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
RNF4-210ENST00000508235 PRSS3P2Q8NHM4 247 aa9.88□□□□□ -0.83
RNF4-210ENST00000508235 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
RNF4-210ENST00000508235 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
RNF4-210ENST00000508235 MRPS36P82909 103 aaKnown RBP9.87□□□□□ -0.83
RNF4-210ENST00000508235 CFAP161Q6P656 301 aa9.87□□□□□ -0.83
RNF4-210ENST00000508235 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
RNF4-210ENST00000508235 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
RNF4-210ENST00000508235 C1orf196B1AJZ1 125 aa9.86□□□□□ -0.83
RNF4-210ENST00000508235 GCSHP23434 173 aa9.86□□□□□ -0.83
RNF4-210ENST00000508235 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
RNF4-210ENST00000508235 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
RNF4-210ENST00000508235 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
RNF4-210ENST00000508235 LINC01549A6NIU2 74 aa9.85□□□□□ -0.83
RNF4-210ENST00000508235 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
RNF4-210ENST00000508235 Q6ZUT4 128 aa9.85□□□□□ -0.83
RNF4-210ENST00000508235 NPSP0C0P6 89 aa9.84□□□□□ -0.83
RNF4-210ENST00000508235 FUSP35637 526 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNF4-210ENST00000508235 XCL1P47992 114 aa9.84□□□□□ -0.83
RNF4-210ENST00000508235 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
RNF4-210ENST00000508235 CBLN2Q8IUK8 224 aa9.84□□□□□ -0.83
RNF4-210ENST00000508235 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 LINC01546A6NGU7 62 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 FOXI1Q12951 378 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 RNASE13Q5GAN3 156 aaKnown RBP9.83□□□□□ -0.84
RNF4-210ENST00000508235 Q6ZN92 141 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
RNF4-210ENST00000508235 PAPPA-AS1Q5QFB9 102 aa9.82□□□□□ -0.84
RNF4-210ENST00000508235 TMEM141Q96I45 108 aa9.82□□□□□ -0.84
RNF4-210ENST00000508235 FAT2Q9NYQ8 4349 aa9.82□□□□□ -0.84
RNF4-210ENST00000508235 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 hDV102S1A0JD36 115 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 PRSS1P07477 247 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 TEX43Q6ZNM6 134 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 C2orf88Q9BSF0 95 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 BIRC6Q9NR09 4857 aa9.81□□□□□ -0.84
RNF4-210ENST00000508235 RAB5BP61020 215 aa9.8□□□□□ -0.84
RNF4-210ENST00000508235 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
RNF4-210ENST00000508235 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
RNF4-210ENST00000508235 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
RNF4-210ENST00000508235 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
RNF4-210ENST00000508235 IGIPA6NJ69 53 aa9.79□□□□□ -0.84
RNF4-210ENST00000508235 KRTAP10-1P60331 282 aa9.79□□□□□ -0.84
RNF4-210ENST00000508235 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
RNF4-210ENST00000508235 VCX2Q9H322 139 aa9.79□□□□□ -0.84
RNF4-210ENST00000508235 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
RNF4-210ENST00000508235 COX7A2LO14548 114 aa9.78□□□□□ -0.84
RNF4-210ENST00000508235 LINC00614P0C842 121 aa9.78□□□□□ -0.84
RNF4-210ENST00000508235 MALP21145 153 aa9.78□□□□□ -0.84
RNF4-210ENST00000508235 ERASQ7Z444 233 aa9.78□□□□□ -0.84
RNF4-210ENST00000508235 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
RNF4-210ENST00000508235 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.85
RNF4-210ENST00000508235 GVQW2A0A096LPI5 108 aaPredicted RBP9.77□□□□□ -0.85
RNF4-210ENST00000508235 APOMO95445 188 aa9.77□□□□□ -0.85
RNF4-210ENST00000508235 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
RNF4-210ENST00000508235 SCGB3A1Q96QR1 104 aa9.77□□□□□ -0.85
RNF4-210ENST00000508235 PKD1P98161 4303 aa9.76□□□□□ -0.85
RNF4-210ENST00000508235 AMELXQ99217 191 aa9.76□□□□□ -0.85
RNF4-210ENST00000508235 SEC11AP67812 179 aa9.75□□□□□ -0.85
RNF4-210ENST00000508235 HIGD2BQ4VC39 106 aa9.75□□□□□ -0.85
RNF4-210ENST00000508235 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
RNF4-210ENST00000508235 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
RNF4-210ENST00000508235 UBE2D1P51668 147 aa9.74□□□□□ -0.85
RNF4-210ENST00000508235 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
RNF4-210ENST00000508235 COLCA2A8K830 154 aa9.73□□□□□ -0.85
RNF4-210ENST00000508235 TRGC2P03986 189 aa9.73□□□□□ -0.85
RNF4-210ENST00000508235 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
RNF4-210ENST00000508235 LINC00173Q6ZV60 143 aa9.73□□□□□ -0.85
RNF4-210ENST00000508235 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
RNF4-210ENST00000508235 CHCHD1Q96BP2 118 aaKnown RBP9.73□□□□□ -0.85
RNF4-210ENST00000508235 IGHV3-64A0A075B6Q5 118 aa9.72□□□□□ -0.85
RNF4-210ENST00000508235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms