RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 WFDC2Q14508 124 aa11.34□□□□□ -0.59
CLDND1-209ENST00000503621 BAALCQ8WXS3 180 aa11.34□□□□□ -0.59
CLDND1-209ENST00000503621 IGLV5-52A0A0A0MRZ9 124 aa11.33□□□□□ -0.6
CLDND1-209ENST00000503621 NPSP0C0P6 89 aa11.33□□□□□ -0.6
CLDND1-209ENST00000503621 DGAT2L7PQ6IED9 249 aa11.33□□□□□ -0.6
CLDND1-209ENST00000503621 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
CLDND1-209ENST00000503621 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.6
CLDND1-209ENST00000503621 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
CLDND1-209ENST00000503621 ZNF664Q8N3J9 261 aa11.32□□□□□ -0.6
CLDND1-209ENST00000503621 MAP1LC3AQ9H492 121 aa11.32□□□□□ -0.6
CLDND1-209ENST00000503621 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
CLDND1-209ENST00000503621 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
CLDND1-209ENST00000503621 LRP1BQ9NZR2 4599 aa11.32□□□□□ -0.6
CLDND1-209ENST00000503621 Q8N8P6 123 aa11.31□□□□□ -0.6
CLDND1-209ENST00000503621 NXT2Q9NPJ8 142 aaKnown RBP11.31□□□□□ -0.6
CLDND1-209ENST00000503621 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
CLDND1-209ENST00000503621 RAB5AP20339 215 aa11.3□□□□□ -0.6
CLDND1-209ENST00000503621 G0S2P27469 103 aa11.3□□□□□ -0.6
CLDND1-209ENST00000503621 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
CLDND1-209ENST00000503621 LINC00959A0A1B0GUT2 108 aa11.29□□□□□ -0.6
CLDND1-209ENST00000503621 USP17L23D6RBM5 183 aa11.29□□□□□ -0.6
CLDND1-209ENST00000503621 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
CLDND1-209ENST00000503621 Q6ZSA8 131 aa11.29□□□□□ -0.6
CLDND1-209ENST00000503621 KIAA1109Q2LD37 5005 aa11.28□□□□□ -0.6
CLDND1-209ENST00000503621 DNAH5Q8TE73 4624 aa11.28□□□□□ -0.6
CLDND1-209ENST00000503621 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
CLDND1-209ENST00000503621 APOC3P02656 99 aa11.28□□□□□ -0.6
CLDND1-209ENST00000503621 KRTAP10-1P60331 282 aa11.28□□□□□ -0.6
CLDND1-209ENST00000503621 CNBPP62633 177 aaKnown RBP11.28□□□□□ -0.6
CLDND1-209ENST00000503621 CLPSL2Q6UWE3 100 aa11.28□□□□□ -0.6
CLDND1-209ENST00000503621 LINC01546A6NGU7 62 aa11.27□□□□□ -0.61
CLDND1-209ENST00000503621 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
CLDND1-209ENST00000503621 ORMDL2Q53FV1 153 aa11.27□□□□□ -0.61
CLDND1-209ENST00000503621 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
CLDND1-209ENST00000503621 SS18Q15532 418 aa11.26□□□□□ -0.61
CLDND1-209ENST00000503621 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
CLDND1-209ENST00000503621 HERC2O95714 4834 aa11.25□□□□□ -0.61
CLDND1-209ENST00000503621 IGLV10-54A0A075B6I4 117 aa11.25□□□□□ -0.61
CLDND1-209ENST00000503621 LECT2O14960 151 aa11.25□□□□□ -0.61
CLDND1-209ENST00000503621 PRSS1P07477 247 aa11.25□□□□□ -0.61
CLDND1-209ENST00000503621 FOXI1Q12951 378 aa11.25□□□□□ -0.61
CLDND1-209ENST00000503621 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
CLDND1-209ENST00000503621 C9orf163Q8N9P6 203 aa11.24□□□□□ -0.61
CLDND1-209ENST00000503621 ALKBH7Q9BT30 221 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-209ENST00000503621 GAGE12HA6NDE8 117 aa11.23□□□□□ -0.61
CLDND1-209ENST00000503621 XGP55808 180 aa11.23□□□□□ -0.61
CLDND1-209ENST00000503621 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
CLDND1-209ENST00000503621 IFI27P40305 119 aaPredicted RBP11.22□□□□□ -0.61
CLDND1-209ENST00000503621 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
CLDND1-209ENST00000503621 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
CLDND1-209ENST00000503621 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
CLDND1-209ENST00000503621 CYSLTR1Q9Y271 337 aa11.22□□□□□ -0.61
CLDND1-209ENST00000503621 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
CLDND1-209ENST00000503621 RYR1P21817 5038 aa11.21□□□□□ -0.62
CLDND1-209ENST00000503621 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
CLDND1-209ENST00000503621 Q6ZUT4 128 aa11.2□□□□□ -0.62
CLDND1-209ENST00000503621 Q8N1X5 172 aa11.2□□□□□ -0.62
CLDND1-209ENST00000503621 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
CLDND1-209ENST00000503621 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
CLDND1-209ENST00000503621 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.19□□□□□ -0.62
CLDND1-209ENST00000503621 LOC389332A0A1B0GUA5 103 aa11.19□□□□□ -0.62
CLDND1-209ENST00000503621 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
CLDND1-209ENST00000503621 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
CLDND1-209ENST00000503621 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
CLDND1-209ENST00000503621 TMEM141Q96I45 108 aa11.19□□□□□ -0.62
CLDND1-209ENST00000503621 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
CLDND1-209ENST00000503621 FUSP35637 526 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLDND1-209ENST00000503621 KIAA1644Q3SXP7 199 aa11.18□□□□□ -0.62
CLDND1-209ENST00000503621 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
CLDND1-209ENST00000503621 AMELXQ99217 191 aa11.18□□□□□ -0.62
CLDND1-209ENST00000503621 HSPG2P98160 4391 aa11.18□□□□□ -0.62
CLDND1-209ENST00000503621 APOBP04114 4563 aaKnown RBP11.17□□□□□ -0.62
CLDND1-209ENST00000503621 IGLV4-3A0A075B6K6 122 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 F8WDY8 70 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 XCL1P47992 114 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
CLDND1-209ENST00000503621 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
CLDND1-209ENST00000503621 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 PKIGQ9Y2B9 76 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
CLDND1-209ENST00000503621 COX7A2LO14548 114 aa11.15□□□□□ -0.62
CLDND1-209ENST00000503621 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
CLDND1-209ENST00000503621 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 APOMO95445 188 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 SLPIP03973 132 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 Q6ZN92 141 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 TEX43Q6ZNM6 134 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 ERASQ7Z444 233 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 CHAC1Q9BUX1 264 aa11.14□□□□□ -0.63
CLDND1-209ENST00000503621 SEC11AP67812 179 aa11.13□□□□□ -0.63
CLDND1-209ENST00000503621 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
CLDND1-209ENST00000503621 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms