RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 HCFC1P51610 2035 aa12.02□□□□□ -0.49
HMGXB3-202ENST00000503427 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
HMGXB3-202ENST00000503427 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
HMGXB3-202ENST00000503427 REG3AQ06141 175 aa12□□□□□ -0.49
HMGXB3-202ENST00000503427 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
HMGXB3-202ENST00000503427 NDUFV3P56181 108 aaKnown RBP12□□□□□ -0.49
HMGXB3-202ENST00000503427 LYRM9A8MSI8 78 aa12□□□□□ -0.49
HMGXB3-202ENST00000503427 C10orf99Q6UWK7 81 aa12□□□□□ -0.49
HMGXB3-202ENST00000503427 TRIAP1O43715 76 aa11.99□□□□□ -0.49
HMGXB3-202ENST00000503427 RNASE3P12724 160 aaKnown RBP11.99□□□□□ -0.49
HMGXB3-202ENST00000503427 MYO9AB2RTY4 2548 aa11.99□□□□□ -0.49
HMGXB3-202ENST00000503427 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
HMGXB3-202ENST00000503427 C11orf21Q9P2W6 132 aa11.99□□□□□ -0.49
HMGXB3-202ENST00000503427 RNF183Q96D59 192 aa11.98□□□□□ -0.49
HMGXB3-202ENST00000503427 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
HMGXB3-202ENST00000503427 LY6G6DO95868 133 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 ATG2AQ2TAZ0 1938 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 RBX1P62877 108 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 KLLNB2CW77 178 aa11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 KLK5Q9Y337 293 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-202ENST00000503427 TIMM17BO60830 172 aa11.96□□□□□ -0.49
HMGXB3-202ENST00000503427 UBE2AP49459 152 aa11.96□□□□□ -0.49
HMGXB3-202ENST00000503427 LINC01006Q8NI28 216 aa11.96□□□□□ -0.49
HMGXB3-202ENST00000503427 LINC00310P59036 64 aa11.96□□□□□ -0.49
HMGXB3-202ENST00000503427 HILS1P60008 231 aa11.96□□□□□ -0.49
HMGXB3-202ENST00000503427 PRR9Q5T870 116 aa11.96□□□□□ -0.49
HMGXB3-202ENST00000503427 TSHBP01222 138 aa11.96□□□□□ -0.5
HMGXB3-202ENST00000503427 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.5
HMGXB3-202ENST00000503427 SORL1Q92673 2214 aa11.96□□□□□ -0.5
HMGXB3-202ENST00000503427 TRBV6-8A0A0A6YYG3 113 aa11.95□□□□□ -0.5
HMGXB3-202ENST00000503427 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
HMGXB3-202ENST00000503427 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
HMGXB3-202ENST00000503427 TANC2Q9HCD6 1990 aa11.95□□□□□ -0.5
HMGXB3-202ENST00000503427 PROK1P58294 105 aa11.95□□□□□ -0.5
HMGXB3-202ENST00000503427 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 PIK3CD-AS1Q5SR53 167 aa11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 UQCRQO14949 82 aa11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
HMGXB3-202ENST00000503427 ATP5EP2Q5VTU8 51 aa11.93□□□□□ -0.5
HMGXB3-202ENST00000503427 C9orf85Q96MD7 179 aa11.93□□□□□ -0.5
HMGXB3-202ENST00000503427 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
HMGXB3-202ENST00000503427 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
HMGXB3-202ENST00000503427 MIFP14174 115 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 ARHGAP32A7KAX9 2087 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 CRYGDP07320 174 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 C5orf47Q569G3 176 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 Q8N976 141 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 BPY2O14599 106 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 NDUFC2O95298 119 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 AVPP01185 164 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 Q6ZS46 218 aa11.91□□□□□ -0.5
HMGXB3-202ENST00000503427 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.5
HMGXB3-202ENST00000503427 MRPS12O15235 138 aaKnown RBP11.9□□□□□ -0.5
HMGXB3-202ENST00000503427 C2CD3Q4AC94 2353 aa11.9□□□□□ -0.51
HMGXB3-202ENST00000503427 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
HMGXB3-202ENST00000503427 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
HMGXB3-202ENST00000503427 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
HMGXB3-202ENST00000503427 MRPS36P82909 103 aaKnown RBP11.89□□□□□ -0.51
HMGXB3-202ENST00000503427 DCANP1Q8TF63 244 aa11.88□□□□□ -0.51
HMGXB3-202ENST00000503427 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
HMGXB3-202ENST00000503427 SLPIP03973 132 aa11.88□□□□□ -0.51
HMGXB3-202ENST00000503427 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
HMGXB3-202ENST00000503427 A0A1W2PPR1 153 aa11.88□□□□□ -0.51
HMGXB3-202ENST00000503427 A8MZ25 164 aa11.88□□□□□ -0.51
HMGXB3-202ENST00000503427 LST1O00453 97 aa11.87□□□□□ -0.51
HMGXB3-202ENST00000503427 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
HMGXB3-202ENST00000503427 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
HMGXB3-202ENST00000503427 CHKB-CPT1BH3BT56 60 aa11.86□□□□□ -0.51
HMGXB3-202ENST00000503427 NDUFA7O95182 113 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 C20orf197Q8N268 126 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 EXPH5Q8NEV8 1989 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 LINC00482Q8N8I6 264 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 C14orf177Q52M58 125 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 KRTAP10-9P60411 292 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
HMGXB3-202ENST00000503427 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 PRB2P02812 416 aaPredicted RBP11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 C3orf22Q8N5N4 141 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 BRI3O95415 125 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 UBE2D1P51668 147 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 ZNF580Q9UK33 172 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
HMGXB3-202ENST00000503427 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
HMGXB3-202ENST00000503427 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
HMGXB3-202ENST00000503427 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
HMGXB3-202ENST00000503427 H0Y9J4 135 aa11.82□□□□□ -0.52
HMGXB3-202ENST00000503427 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
HMGXB3-202ENST00000503427 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
HMGXB3-202ENST00000503427 MRGPRG-AS1Q2M3A8 158 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms