RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 DIP2BQ9P265 1576 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 BTAF1O14981 1849 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 NCOA6Q14686 2063 aaPredicted RBP2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 PPP1R17O96001 155 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 UQCRHP07919 91 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 Q86TA4 180 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 LAMA4Q16363 1823 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 DNMBPQ6XZF7 1577 aa2.19□□□□□ -2.06
AC109349.1-201ENST00000503299 CDK13Q14004 1512 aaKnown RBP2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 CLASP1Q7Z460 1538 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 A0A0G2JND7 137 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 LOC285095A0A1B0GVY8 99 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 HMGN4O00479 90 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 SPAG11AQ6PDA7 123 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 LINC00208Q96KT6 92 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 OBSCN-AS1Q96MR7 158 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 KRTAP4-1Q9BYQ7 146 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 MRC1P22897 1456 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 SDK1Q7Z5N4 2213 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 E9PCH4 1651 aa2.18□□□□□ -2.06
AC109349.1-201ENST00000503299 EDC4Q6P2E9 1401 aaKnown RBP2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 MAP2P11137 1827 aaKnown RBP2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 A0A087WTM6 91 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 TMEM14DPA8MWL7 114 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 KLKP1Q107X0 134 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 ALKAL2Q6UX46 152 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 ZNF720Q7Z2F6 126 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 ZNF563Q8TA94 476 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 V9GYV3 84 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 POLA1P09884 1462 aaPredicted RBP2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 EHBP1L1Q8N3D4 1523 aa2.17□□□□□ -2.06
AC109349.1-201ENST00000503299 SCN7AQ01118 1682 aa2.16□□□□□ -2.06
AC109349.1-201ENST00000503299 PCOTHQ58A44 107 aa2.16□□□□□ -2.06
AC109349.1-201ENST00000503299 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
AC109349.1-201ENST00000503299 V9GYH0 126 aa2.16□□□□□ -2.06
AC109349.1-201ENST00000503299 PPRC1Q5VV67 1664 aaKnown RBP2.15□□□□□ -2.06
AC109349.1-201ENST00000503299 NLRP1Q9C000 1473 aa2.15□□□□□ -2.06
AC109349.1-201ENST00000503299 TRBV25-1A0A075B6N4 114 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 FXYD1O00168 92 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 BCE1O60756 84 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 CCL18P55774 89 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 SFTA2Q6UW10 78 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 R4GMQ9 66 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 ASCC3Q8N3C0 2202 aaKnown RBP2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 ERICH3Q5RHP9 1530 aa2.15□□□□□ -2.07
AC109349.1-201ENST00000503299 CCDC88BA6NC98 1476 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 NRXN1Q9ULB1 1477 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 CAV3P56539 151 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 ADIRFQ15847 76 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 ETDBQ3ZM63 59 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 TMEM170BQ5T4T1 132 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 Q6ZQY7 126 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 AMELXQ99217 191 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 ST20Q9HBF5 79 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 SPCS1Q9Y6A9 102 aa2.14□□□□□ -2.07
AC109349.1-201ENST00000503299 URB2Q14146 1524 aaKnown RBP2.13□□□□□ -2.07
AC109349.1-201ENST00000503299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.13□□□□□ -2.07
AC109349.1-201ENST00000503299 PMCHL1Q16048 86 aa2.13□□□□□ -2.07
AC109349.1-201ENST00000503299 WFDC6Q9BQY6 131 aa2.13□□□□□ -2.07
AC109349.1-201ENST00000503299 ABCA1O95477 2261 aa2.13□□□□□ -2.07
AC109349.1-201ENST00000503299 IQSEC2Q5JU85 1478 aa2.13□□□□□ -2.07
AC109349.1-201ENST00000503299 ZNF236Q9UL36 1845 aa2.12□□□□□ -2.07
AC109349.1-201ENST00000503299 C10orf142B7Z368 130 aa2.12□□□□□ -2.07
AC109349.1-201ENST00000503299 FAM223AQ8IWN6 122 aa2.12□□□□□ -2.07
AC109349.1-201ENST00000503299 CCL19Q99731 98 aa2.12□□□□□ -2.07
AC109349.1-201ENST00000503299 TMEM14BQ9NUH8 114 aa2.12□□□□□ -2.07
AC109349.1-201ENST00000503299 CCDC141Q6ZP82 1450 aa2.12□□□□□ -2.07
AC109349.1-201ENST00000503299 IFT172Q9UG01 1749 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 TARBP1Q13395 1621 aaKnown RBP2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 A0A1W2PPM0 123 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 SAA2P0DJI9 122 aaPredicted RBP2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 EFNA4P52798 201 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 SMIM11AP58511 58 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 NMSQ5H8A3 153 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 ZCCHC13Q8WW36 166 aaKnown RBP2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 LINC01600Q96MT4 127 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 HIVEP2P31629 2446 aa2.11□□□□□ -2.07
AC109349.1-201ENST00000503299 COL4A1P02462 1669 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 FANCD2Q9BXW9 1451 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 F8VRH5 84 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 C10orf99Q6UWK7 81 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 Q96NJ1 140 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 ARL2-SNX15V9GYD0 113 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 NUP188Q5SRE5 1749 aa2.1□□□□□ -2.07
AC109349.1-201ENST00000503299 PTPN23Q9H3S7 1636 aa2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 RGPD8O14715 1765 aaPredicted RBP2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 RGPD5Q99666 1765 aa2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 M0R135 149 aa2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 SNRPFP62306 86 aaKnown RBP2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 WFDC2Q14508 124 aa2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 BAGE3Q86Y29 109 aa2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.07
AC109349.1-201ENST00000503299 KIF21BO75037 1637 aa2.09□□□□□ -2.08
AC109349.1-201ENST00000503299 ABCC2Q92887 1545 aa2.08□□□□□ -2.08
AC109349.1-201ENST00000503299 CFAP74Q9C0B2 1584 aa2.08□□□□□ -2.08
AC109349.1-201ENST00000503299 KANTRA0A1W2PQU2 76 aa2.08□□□□□ -2.08
AC109349.1-201ENST00000503299 F2Z2F3 143 aa2.08□□□□□ -2.08
AC109349.1-201ENST00000503299 CACNA1BQ00975 2339 aa2.08□□□□□ -2.08
AC109349.1-201ENST00000503299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms