RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CDC42SE2Q9NRR3 84 aa13.83□□□□□ -0.2
CDC42SE2-206ENST00000503291 VPS13DQ5THJ4 4388 aa13.82□□□□□ -0.2
CDC42SE2-206ENST00000503291 ANGP03950 147 aaKnown RBP13.82□□□□□ -0.2
CDC42SE2-206ENST00000503291 TIMM17AQ99595 171 aa13.82□□□□□ -0.2
CDC42SE2-206ENST00000503291 KLK12Q9UKR0 248 aa13.82□□□□□ -0.2
CDC42SE2-206ENST00000503291 DNAH1Q9P2D7 4330 aa13.82□□□□□ -0.2
CDC42SE2-206ENST00000503291 ZNF664Q8N3J9 261 aa13.81□□□□□ -0.2
CDC42SE2-206ENST00000503291 C5orf52A6NGY3 159 aa13.81□□□□□ -0.2
CDC42SE2-206ENST00000503291 LEPROTL1O95214 131 aa13.81□□□□□ -0.2
CDC42SE2-206ENST00000503291 FABP4P15090 132 aa13.81□□□□□ -0.2
CDC42SE2-206ENST00000503291 Q6ZUT4 128 aa13.81□□□□□ -0.2
CDC42SE2-206ENST00000503291 IGLV4-3A0A075B6K6 122 aa13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 RNASE13Q5GAN3 156 aaKnown RBP13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 HIST3H2BBQ8N257 126 aa13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 TMEM141Q96I45 108 aa13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 MRPS36P82909 103 aaKnown RBP13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 LINC00173Q6ZV60 143 aa13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 LINC00269Q8N2A0 174 aa13.8□□□□□ -0.2
CDC42SE2-206ENST00000503291 TRAV9-2A0A087WT02 112 aa13.79□□□□□ -0.2
CDC42SE2-206ENST00000503291 ATP5LO75964 103 aa13.79□□□□□ -0.2
CDC42SE2-206ENST00000503291 NPSP0C0P6 89 aa13.78□□□□□ -0.2
CDC42SE2-206ENST00000503291 K7EP13 123 aa13.78□□□□□ -0.2
CDC42SE2-206ENST00000503291 CLPSL2Q6UWE3 100 aa13.77□□□□□ -0.21
CDC42SE2-206ENST00000503291 C10orf126Q8N4M7 172 aa13.77□□□□□ -0.21
CDC42SE2-206ENST00000503291 HSPB8Q9UJY1 196 aa13.77□□□□□ -0.21
CDC42SE2-206ENST00000503291 NBDYA0A0U1RRE5 68 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 S100A2P29034 98 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 Q6ZN92 141 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 IFI27L1Q96BM0 104 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 KRTAP1-5Q9BYS1 174 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 VCX2Q9H322 139 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 REG3AQ06141 175 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 PAPPA-AS1Q5QFB9 102 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 PRR34Q9NV39 138 aa13.76□□□□□ -0.21
CDC42SE2-206ENST00000503291 IBA57-AS1B1ANH7 110 aa13.75□□□□□ -0.21
CDC42SE2-206ENST00000503291 ENHOQ6UWT2 76 aa13.75□□□□□ -0.21
CDC42SE2-206ENST00000503291 BAALCQ8WXS3 180 aa13.75□□□□□ -0.21
CDC42SE2-206ENST00000503291 UBE2WQ96B02 151 aa13.75□□□□□ -0.21
CDC42SE2-206ENST00000503291 PACRGQ96M98 296 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-206ENST00000503291 IGKV3OR2-268A0A0C4DH90 116 aa13.74□□□□□ -0.21
CDC42SE2-206ENST00000503291 TEX43Q6ZNM6 134 aa13.74□□□□□ -0.21
CDC42SE2-206ENST00000503291 AMELXQ99217 191 aa13.74□□□□□ -0.21
CDC42SE2-206ENST00000503291 HIST1H2BLQ99880 126 aa13.74□□□□□ -0.21
CDC42SE2-206ENST00000503291 M0R2N4 97 aa13.73□□□□□ -0.21
CDC42SE2-206ENST00000503291 TTC32Q5I0X7 151 aa13.73□□□□□ -0.21
CDC42SE2-206ENST00000503291 IFITM10A6NMD0 228 aa13.73□□□□□ -0.21
CDC42SE2-206ENST00000503291 CRPP02741 224 aa13.73□□□□□ -0.21
CDC42SE2-206ENST00000503291 PRSS1P07477 247 aa13.73□□□□□ -0.21
CDC42SE2-206ENST00000503291 LCE6AA0A183 80 aa13.72□□□□□ -0.21
CDC42SE2-206ENST00000503291 ALMS1Q8TCU4 4167 aa13.72□□□□□ -0.21
CDC42SE2-206ENST00000503291 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.21
CDC42SE2-206ENST00000503291 PMVKQ15126 192 aa13.71□□□□□ -0.21
CDC42SE2-206ENST00000503291 CST9LQ9H4G1 147 aa13.71□□□□□ -0.21
CDC42SE2-206ENST00000503291 C2orf88Q9BSF0 95 aa13.71□□□□□ -0.22
CDC42SE2-206ENST00000503291 LINC00959A0A1B0GUT2 108 aa13.7□□□□□ -0.22
CDC42SE2-206ENST00000503291 MAP1LC3CQ9BXW4 147 aa13.7□□□□□ -0.22
CDC42SE2-206ENST00000503291 Q9HAA7 133 aa13.7□□□□□ -0.22
CDC42SE2-206ENST00000503291 TRAV8-3A0A0A6YYJ7 113 aa13.69□□□□□ -0.22
CDC42SE2-206ENST00000503291 PRSS29PA6NIE9 313 aa13.69□□□□□ -0.22
CDC42SE2-206ENST00000503291 MIAQ16674 131 aa13.69□□□□□ -0.22
CDC42SE2-206ENST00000503291 Q6ZR54 194 aa13.69□□□□□ -0.22
CDC42SE2-206ENST00000503291 H0Y8G0 127 aa13.69□□□□□ -0.22
CDC42SE2-206ENST00000503291 KMT2AQ03164 3969 aa13.69□□□□□ -0.22
CDC42SE2-206ENST00000503291 IGLV10-54A0A075B6I4 117 aa13.68□□□□□ -0.22
CDC42SE2-206ENST00000503291 UBE2D1P51668 147 aa13.67□□□□□ -0.22
CDC42SE2-206ENST00000503291 SS18Q15532 418 aa13.67□□□□□ -0.22
CDC42SE2-206ENST00000503291 TRAV12-1A0A0B4J245 112 aa13.66□□□□□ -0.22
CDC42SE2-206ENST00000503291 TRAV8-4A0A0B4J246 113 aa13.66□□□□□ -0.22
CDC42SE2-206ENST00000503291 C3orf79P0CE67 100 aa13.66□□□□□ -0.22
CDC42SE2-206ENST00000503291 SYS1-DBNDD2H3BUS1 97 aa13.66□□□□□ -0.22
CDC42SE2-206ENST00000503291 KRTDAPP60985 99 aa13.66□□□□□ -0.22
CDC42SE2-206ENST00000503291 IGKV2D-24A0A075B6R9 120 aa13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 CCL25O15444 150 aa13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 A0A0J9YXV3 536 aa13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 XCL1P47992 114 aa13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 CHCHD10Q8WYQ3 142 aaPredicted RBP13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 C1orf43Q9BWL3 253 aa13.64□□□□□ -0.23
CDC42SE2-206ENST00000503291 CHTOPQ9Y3Y2 248 aaKnown RBP13.63□□□□□ -0.23
CDC42SE2-206ENST00000503291 SACSQ9NZJ4 4579 aa13.63□□□□□ -0.23
CDC42SE2-206ENST00000503291 ODF1Q14990 250 aa13.63□□□□□ -0.23
CDC42SE2-206ENST00000503291 SPATA12Q7Z6I5 190 aa13.63□□□□□ -0.23
CDC42SE2-206ENST00000503291 FAM19A3Q7Z5A8 133 aa13.62□□□□□ -0.23
CDC42SE2-206ENST00000503291 COX6A2Q02221 97 aa13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 KRTAP26-1Q6PEX3 210 aa13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 PET117Q6UWS5 81 aa13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 OR10D4PQ8NGN7 298 aa13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 RMI2Q96E14 147 aa13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 MRPL35Q9NZE8 188 aaKnown RBP13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 IGLV4-69A0A075B6H9 119 aa13.61□□□□□ -0.23
CDC42SE2-206ENST00000503291 HYDINQ4G0P3 5121 aa13.6□□□□□ -0.23
CDC42SE2-206ENST00000503291 F8VRH5 84 aa13.6□□□□□ -0.23
CDC42SE2-206ENST00000503291 SEC11AP67812 179 aa13.6□□□□□ -0.23
CDC42SE2-206ENST00000503291 CD164L2Q6UWJ8 174 aa13.6□□□□□ -0.23
CDC42SE2-206ENST00000503291 NFE4Q86UQ8 179 aa13.6□□□□□ -0.23
CDC42SE2-206ENST00000503291 PMCHL2Q9BQD1 86 aa13.6□□□□□ -0.23
CDC42SE2-206ENST00000503291 GAGE12HA6NDE8 117 aa13.59□□□□□ -0.23
CDC42SE2-206ENST00000503291 C6orf223Q8N319 242 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms