RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CLEC19AQ6UXS0 136 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 C9orf47Q6ZRZ4 202 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGKV3D-20A0A0C4DH25 116 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 TMEM223A0PJW6 202 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 J3QQQ9 107 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 PFN2P35080 140 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 LY6G5BQ8NDX9 201 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 NSD1Q96L73 2696 aaPredicted RBP4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 ATP6V0E1O15342 81 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 ADAMTSL4-AS1Q5T5F5 129 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 C16orf95Q9H693 158 aa4.29□□□□□ -1.72
SOX2-OT-218ENST00000498731 MUC4Q99102 2169 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 DAND5Q8N907 189 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 ZNF256Q9Y2P7 627 aaPredicted RBP4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGKV3D-7A0A0C4DH55 119 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 HILS1P60008 231 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 C15orf32Q32M92 178 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 LINC00474Q9P2X8 69 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 IGKV1-17P01599 117 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 TRACP01848 142 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
SOX2-OT-218ENST00000498731 NXPH4O95158 308 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 MSMBP08118 114 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 C2orf66Q6UXQ4 117 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 ZNF491Q8N8L2 437 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 SHANK2-AS3Q9BTD1 123 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 MGAM2Q2M2H8 2515 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGHV1-69DA0A0B4J2H0 117 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGHV1-69P01742 117 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 P0DMU3 169 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 FAM231AP0DMU4 169 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 FAM231CP0DMU5 169 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 HOXD3P31249 432 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 BLCAPP62952 87 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 MINOS1Q5TGZ0 78 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 FP248Q71RG6 208 aaPredicted RBP4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 C5orf38Q86SI9 138 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 MINOS1-NBL1R4GNA1 71 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGHV7-81A0A0B4J1V7 117 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 DEFB1P60022 68 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 SS18Q15532 418 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 Q8N9W7 124 aa4.27□□□□□ -1.73
SOX2-OT-218ENST00000498731 TRAV12-1A0A0B4J245 112 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGHV7-4-1A0A0J9YVY3 117 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 I3L3M4 83 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 K7EIM0 57 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 HIST1H4AP62805 103 aaKnown RBP4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 B4DSR2 109 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 DEFB121Q5J5C9 76 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 LYRM7Q5U5X0 104 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 DCANP1Q8TF63 244 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
SOX2-OT-218ENST00000498731 ODF3BA8MYP8 253 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 I3L2K1 104 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 RNF5Q99942 180 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 MXRA5Q9NR99 2828 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 SMIM2Q9BVW6 85 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 TP53TG1Q9Y2A0 90 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGHV4-59P01825 116 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 Q8N2B8 174 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 LITAFQ99732 161 aa4.25□□□□□ -1.73
SOX2-OT-218ENST00000498731 DEFB112Q30KQ8 113 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 PRR9Q5T870 116 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 SPATA3Q8NHX4 192 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 MOB4Q9Y3A3 225 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 TRBV6-1A0A0K0K1D8 114 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 LINC01600Q96MT4 127 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 TRBV30A0A0K0K1B3 111 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 DAZ2Q13117 558 aaKnown RBP4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 LYPD5Q6UWN5 251 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 DAZ4Q86SG3 579 aaKnown RBP4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 NPBQ8NG41 125 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 FAM218AQ96MZ4 157 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 TIMM21Q9BVV7 248 aa4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 DAZ1Q9NQZ3 744 aaKnown RBP4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 DAZ3Q9NR90 486 aaKnown RBP4.24□□□□□ -1.73
SOX2-OT-218ENST00000498731 H3BRN7 92 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 M0R381 172 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 LST1O00453 97 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 C9orf85Q96MD7 179 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 SPANXA1Q9NS26 97 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 TMEM14CQ9P0S9 112 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGLV11-55A0A075B6I3 123 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 A0A0B4J2C4 111 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 TMEM258P61165 79 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 RNASE13Q5GAN3 156 aaKnown RBP4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 Q9HAA7 133 aa4.23□□□□□ -1.73
SOX2-OT-218ENST00000498731 CLPSL1A2RUU4 121 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms