RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 BAALCQ8WXS3 180 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 PRORYQ9H606 182 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 MUC4Q99102 2169 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 ZZEF1O43149 2961 aa3.19□□□□□ -1.9
SSR3-209ENST00000498205 FLNCQ14315 2725 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 ZNF462Q96JM2 2506 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 A0A0J9YXY3 114 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 LY6HO94772 140 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 MSMBP08118 114 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 LGALS1P09382 135 aaKnown RBP3.18□□□□□ -1.9
SSR3-209ENST00000498205 TCTAP57738 103 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 SNRPD3P62318 126 aaKnown RBP3.18□□□□□ -1.9
SSR3-209ENST00000498205 PRB3Q04118 309 aaPredicted RBP3.18□□□□□ -1.9
SSR3-209ENST00000498205 PRR9Q5T870 116 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 MTURNQ8N3F0 131 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 HIST1H4GQ99525 98 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 RHPN1-AS1Q9BWJ2 59 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 NHP2Q9NX24 153 aaKnown RBP3.18□□□□□ -1.9
SSR3-209ENST00000498205 S4R3C0 116 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 DOPEY2Q9Y3R5 2298 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 KALRNO60229 2985 aa3.18□□□□□ -1.9
SSR3-209ENST00000498205 IGLV4-69A0A075B6H9 119 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 A0A0J9YY99 117 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 M0QY20 66 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 CRYGDP07320 174 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 UQCRFS1P47985 274 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 CFAP126Q5VTH2 177 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 MORN3Q6PF18 240 aaPredicted RBP3.17□□□□□ -1.9
SSR3-209ENST00000498205 UNQ9165/PRO28630Q6UXU0 137 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 Q8N2B8 174 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 C10orf126Q8N4M7 172 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 TEX29Q8N6K0 151 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 PLEKHB2Q96CS7 222 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 AMELXQ99217 191 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 PRADC1Q9BSG0 188 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 SPANXDQ9BXN6 97 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 SPANXA1Q9NS26 97 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 ITPR1Q14643 2758 aa3.17□□□□□ -1.9
SSR3-209ENST00000498205 ANKRD17O75179 2603 aaKnown RBP3.16□□□□□ -1.9
SSR3-209ENST00000498205 IGHV1OR15-1A0A075B7D0 117 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.16□□□□□ -1.9
SSR3-209ENST00000498205 TRAV26-2A0A0B4J265 109 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 ZNF815PA8K554 130 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 A8MWV9 139 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TMEM238C9JI98 176 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TMEM262E9PQX1 116 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TIMM17BO60830 172 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 IGHV3-30P01768 117 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 P0DMU3 169 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 FAM231AP0DMU4 169 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 FAM231CP0DMU5 169 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 IGHV3-30-5P0DP03 117 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 MRPS36P82909 103 aaKnown RBP3.16□□□□□ -1.9
SSR3-209ENST00000498205 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TEN1Q86WV5 123 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 NDUFA11Q86Y39 141 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 UBE2E2Q96LR5 201 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 SIGMAR1Q99720 223 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TIMM21Q9BVV7 248 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 TIMM8BQ9Y5J9 83 aaPredicted RBP3.16□□□□□ -1.9
SSR3-209ENST00000498205 FAM208BQ5VWN6 2430 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 DCHS2Q6V1P9 2916 aa3.16□□□□□ -1.9
SSR3-209ENST00000498205 A0A096LNT2 108 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 H3BUX3 64 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 I3L3M4 83 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 J3QQQ9 107 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 LEPROTO15243 131 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 IFITM1P13164 125 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 FXYD7P58549 80 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 SMAGPQ0VAQ4 97 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 SCGB2A2Q13296 93 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 AMTNQ6UX39 209 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 SCGB1D4Q6XE38 83 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 TMEM86BQ8N661 226 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 PPDPFLQ8WWR9 84 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 COPS9Q8WXC6 57 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 RPL39LQ96EH5 51 aaKnown RBP3.15□□□□□ -1.91
SSR3-209ENST00000498205 CCL19Q99731 98 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 SPXQ9BT56 116 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 TP53TG1Q9Y2A0 90 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 CSDC2Q9Y534 153 aaKnown RBP3.15□□□□□ -1.91
SSR3-209ENST00000498205 IGSF10Q6WRI0 2623 aa3.15□□□□□ -1.91
SSR3-209ENST00000498205 LRBAP50851 2863 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 IGHV3OR16-8A0A075B7F1 116 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 TRAV25A0A0B4J276 109 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 TRBV30A0A0K0K1B3 111 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 A0A1B0GV72 72 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 FAM240AA0A1B0GVK7 77 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 TINCRA0A1B0GVN0 87 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 TMEM223A0PJW6 202 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 TRBV12-3P01733 135 aa3.14□□□□□ -1.91
SSR3-209ENST00000498205 RPL13AP40429 203 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms