RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 MAP6D1Q9H9H5 199 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 UBE2D4Q9Y2X8 147 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 CUBNO60494 3623 aa8.39□□□□□ -1.07
RFC4-214ENST00000494047 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
RFC4-214ENST00000494047 H7C423 109 aa8.38□□□□□ -1.07
RFC4-214ENST00000494047 SLC25A20O43772 301 aa8.38□□□□□ -1.07
RFC4-214ENST00000494047 EMP1P54849 157 aa8.38□□□□□ -1.07
RFC4-214ENST00000494047 DAZ2Q13117 558 aaKnown RBP8.38□□□□□ -1.07
RFC4-214ENST00000494047 Q1RN00 199 aa8.38□□□□□ -1.07
RFC4-214ENST00000494047 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
RFC4-214ENST00000494047 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
RFC4-214ENST00000494047 RPL13AP40429 203 aaKnown RBP8.37□□□□□ -1.07
RFC4-214ENST00000494047 HILS1P60008 231 aa8.37□□□□□ -1.07
RFC4-214ENST00000494047 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
RFC4-214ENST00000494047 LINC01587Q99440 93 aa8.37□□□□□ -1.07
RFC4-214ENST00000494047 GTSF1LQ9H1H1 148 aa8.37□□□□□ -1.07
RFC4-214ENST00000494047 STAB1Q9NY15 2570 aa8.37□□□□□ -1.07
RFC4-214ENST00000494047 NDUFA1O15239 70 aa8.36□□□□□ -1.07
RFC4-214ENST00000494047 HERV-K104P63124 156 aa8.36□□□□□ -1.07
RFC4-214ENST00000494047 RPL36AP83881 106 aaKnown RBP8.36□□□□□ -1.07
RFC4-214ENST00000494047 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
RFC4-214ENST00000494047 KRTAP24-1Q3LI83 254 aa8.36□□□□□ -1.07
RFC4-214ENST00000494047 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
RFC4-214ENST00000494047 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
RFC4-214ENST00000494047 RPL36ALQ969Q0 106 aaKnown RBP8.36□□□□□ -1.07
RFC4-214ENST00000494047 CHCHD7Q9BUK0 85 aa8.36□□□□□ -1.07
RFC4-214ENST00000494047 FBN1P35555 2871 aaKnown RBP8.36□□□□□ -1.07
RFC4-214ENST00000494047 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 EDN2P20800 178 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 DEFB114Q30KQ6 69 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 STHQ8IWL8 128 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 ANKRD29Q8N6D5 301 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 DNHD1Q96M86 4753 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
RFC4-214ENST00000494047 IL17DQ8TAD2 202 aa8.35□□□□□ -1.07
RFC4-214ENST00000494047 FAM240AA0A1B0GVK7 77 aa8.34□□□□□ -1.07
RFC4-214ENST00000494047 PF4P02776 101 aa8.34□□□□□ -1.07
RFC4-214ENST00000494047 SLURP1P55000 103 aa8.34□□□□□ -1.07
RFC4-214ENST00000494047 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
RFC4-214ENST00000494047 C10orf99Q6UWK7 81 aa8.34□□□□□ -1.07
RFC4-214ENST00000494047 OVOL2Q9BRP0 275 aa8.34□□□□□ -1.07
RFC4-214ENST00000494047 C9JAW5 83 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
RFC4-214ENST00000494047 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 FHL3Q13643 280 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
RFC4-214ENST00000494047 Q6ZUT4 128 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 LITAFQ99732 161 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 ICOSQ9Y6W8 199 aa8.33□□□□□ -1.08
RFC4-214ENST00000494047 IGLV5-39A0A0G2JS06 123 aa8.32□□□□□ -1.08
RFC4-214ENST00000494047 K7EQD1 137 aa8.32□□□□□ -1.08
RFC4-214ENST00000494047 SPINK8P0C7L1 97 aa8.32□□□□□ -1.08
RFC4-214ENST00000494047 Q6Q795 121 aa8.32□□□□□ -1.08
RFC4-214ENST00000494047 TMEM101Q96IK0 257 aa8.32□□□□□ -1.08
RFC4-214ENST00000494047 SELENOKQ9Y6D0 94 aa8.32□□□□□ -1.08
RFC4-214ENST00000494047 ACYP1P07311 99 aa8.31□□□□□ -1.08
RFC4-214ENST00000494047 PRSS2P07478 247 aa8.31□□□□□ -1.08
RFC4-214ENST00000494047 KHDC1LQ5JSQ8 128 aa8.31□□□□□ -1.08
RFC4-214ENST00000494047 UBE2WQ96B02 151 aa8.31□□□□□ -1.08
RFC4-214ENST00000494047 C16orf74Q96GX8 76 aa8.31□□□□□ -1.08
RFC4-214ENST00000494047 OPRPNQ99935 248 aaPredicted RBP8.31□□□□□ -1.08
RFC4-214ENST00000494047 RBMY1BA6NDE4 496 aaKnown RBP8.3□□□□□ -1.08
RFC4-214ENST00000494047 RBMY1EA6NEQ0 496 aaKnown RBP8.3□□□□□ -1.08
RFC4-214ENST00000494047 RNASE1P07998 156 aaKnown RBP8.3□□□□□ -1.08
RFC4-214ENST00000494047 RBMY1DP0C7P1 496 aaKnown RBP8.3□□□□□ -1.08
RFC4-214ENST00000494047 HTN1P15515 57 aa8.3□□□□□ -1.08
RFC4-214ENST00000494047 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
RFC4-214ENST00000494047 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
RFC4-214ENST00000494047 LST1O00453 97 aa8.29□□□□□ -1.08
RFC4-214ENST00000494047 UBE2L6O14933 153 aa8.29□□□□□ -1.08
RFC4-214ENST00000494047 SNCGO76070 127 aa8.29□□□□□ -1.08
RFC4-214ENST00000494047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
RFC4-214ENST00000494047 ESM1Q9NQ30 184 aa8.29□□□□□ -1.08
RFC4-214ENST00000494047 FBN3Q75N90 2809 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 DNAJC9-AS1A6NH13 148 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 TRIAP1O43715 76 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 CKS1BP61024 79 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
RFC4-214ENST00000494047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
RFC4-214ENST00000494047 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 TRAV8-4A0A0B4J246 113 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 TRBV6-4A0A1B0GX49 114 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
RFC4-214ENST00000494047 INSL3P51460 131 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 ODF3L2Q3SX64 289 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
RFC4-214ENST00000494047 TRGV1A0A0A0MS02 117 aa8.26□□□□□ -1.09
RFC4-214ENST00000494047 TRAV8-3A0A0A6YYJ7 113 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms