RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
SNRNP200-207ENST00000493271 ISOC2Q96AB3 205 aa6.87□□□□□ -1.31
SNRNP200-207ENST00000493271 BTF3L4Q96K17 158 aa6.87□□□□□ -1.31
SNRNP200-207ENST00000493271 GFRA4Q9GZZ7 299 aa6.87□□□□□ -1.31
SNRNP200-207ENST00000493271 LOC105371267A0A1B0GV96 52 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 XKRY2A2RUG3 117 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 F2Z2F3 143 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 SSTP61278 116 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 FER1L6-AS1Q8NA97 138 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
SNRNP200-207ENST00000493271 H7C423 109 aa6.85□□□□□ -1.31
SNRNP200-207ENST00000493271 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNRNP200-207ENST00000493271 HIGD2BQ4VC39 106 aa6.85□□□□□ -1.31
SNRNP200-207ENST00000493271 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
SNRNP200-207ENST00000493271 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 A0A096LNI7 61 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 GAS8-AS1O95177 125 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 NCR2O95944 276 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 SMIM12Q96EX1 92 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 IMMP2LQ96T52 175 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 TPPP3Q9BW30 176 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 BIN3Q9NQY0 253 aa6.84□□□□□ -1.31
SNRNP200-207ENST00000493271 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
SNRNP200-207ENST00000493271 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
SNRNP200-207ENST00000493271 GNG4P50150 75 aa6.83□□□□□ -1.32
SNRNP200-207ENST00000493271 CENPWQ5EE01 88 aa6.83□□□□□ -1.32
SNRNP200-207ENST00000493271 OR2D3Q8NGH3 330 aa6.83□□□□□ -1.32
SNRNP200-207ENST00000493271 TRBV20OR9-2A0A075B6H5 130 aa6.82□□□□□ -1.32
SNRNP200-207ENST00000493271 TRAV9-1A0A075B6T8 112 aa6.82□□□□□ -1.32
SNRNP200-207ENST00000493271 IGKV3OR2-268A0A0C4DH90 116 aa6.82□□□□□ -1.32
SNRNP200-207ENST00000493271 S100A6P06703 90 aa6.82□□□□□ -1.32
SNRNP200-207ENST00000493271 ZNF25P17030 456 aaPredicted RBP6.82□□□□□ -1.32
SNRNP200-207ENST00000493271 ODF1Q14990 250 aa6.82□□□□□ -1.32
SNRNP200-207ENST00000493271 TGIF2-C20orf24A0A0A6YYL0 155 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 IGHV1-58A0A0C4DH39 117 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 C19orf71A6NCJ1 209 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 NTF3P20783 257 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 ZNF664Q8N3J9 261 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 OR5A1Q8NGJ0 315 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
SNRNP200-207ENST00000493271 APCSP02743 223 aa6.8□□□□□ -1.32
SNRNP200-207ENST00000493271 FOXI1Q12951 378 aa6.8□□□□□ -1.32
SNRNP200-207ENST00000493271 RNASEKQ6P5S7 137 aaKnown RBP6.8□□□□□ -1.32
SNRNP200-207ENST00000493271 OCC1Q8TAD7 63 aa6.8□□□□□ -1.32
SNRNP200-207ENST00000493271 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
SNRNP200-207ENST00000493271 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
SNRNP200-207ENST00000493271 FGF6P10767 208 aa6.79□□□□□ -1.32
SNRNP200-207ENST00000493271 CTRLP40313 264 aa6.79□□□□□ -1.32
SNRNP200-207ENST00000493271 LYZL1Q6UWQ5 148 aa6.79□□□□□ -1.32
SNRNP200-207ENST00000493271 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
SNRNP200-207ENST00000493271 K7EN84 100 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 COX19Q49B96 90 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 SMIM15Q7Z3B0 74 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 PSORS1C2Q9UIG4 136 aa6.78□□□□□ -1.32
SNRNP200-207ENST00000493271 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
SNRNP200-207ENST00000493271 LINC00959A0A1B0GUT2 108 aa6.77□□□□□ -1.33
SNRNP200-207ENST00000493271 XCL1P47992 114 aa6.77□□□□□ -1.33
SNRNP200-207ENST00000493271 SS18Q15532 418 aa6.77□□□□□ -1.33
SNRNP200-207ENST00000493271 GATD1Q8NB37 220 aa6.77□□□□□ -1.33
SNRNP200-207ENST00000493271 LPAP08519 4548 aa6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 IGKV2-29A2NJV5 120 aaPredicted RBP6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 CCL25O15444 150 aa6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 TWIST1Q15672 202 aa6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 V9GYV3 84 aa6.76□□□□□ -1.33
SNRNP200-207ENST00000493271 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 SDHAF1A6NFY7 115 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 C5orf52A6NGY3 159 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 I3L3M4 83 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 TRGC2P03986 189 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 S100A8P05109 93 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 CAMPP49913 170 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 TSKUQ8WUA8 353 aa6.75□□□□□ -1.33
SNRNP200-207ENST00000493271 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 TRBV6-5A0A0K0K1A5 114 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 MT-ND6P03923 174 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 PMCHP20382 165 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 AKR1D1P51857 326 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 CT83Q5H943 113 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 MRPL52Q86TS9 123 aaKnown RBP6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
SNRNP200-207ENST00000493271 DIRC1Q969H9 104 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms