RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 Q8N8P6 123 aa9.24□□□□□ -0.93
CCM2-217ENST00000492883 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
CCM2-217ENST00000492883 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
CCM2-217ENST00000492883 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
CCM2-217ENST00000492883 DNAH17Q9UFH2 4485 aa9.23□□□□□ -0.93
CCM2-217ENST00000492883 CDPF1Q6NVV7 123 aa9.23□□□□□ -0.93
CCM2-217ENST00000492883 NXT2Q9NPJ8 142 aaKnown RBP9.23□□□□□ -0.93
CCM2-217ENST00000492883 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
CCM2-217ENST00000492883 TRAPPC1Q9Y5R8 145 aa9.23□□□□□ -0.93
CCM2-217ENST00000492883 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
CCM2-217ENST00000492883 IFI27P40305 119 aaPredicted RBP9.22□□□□□ -0.93
CCM2-217ENST00000492883 RPL39P62891 51 aaKnown RBP9.22□□□□□ -0.93
CCM2-217ENST00000492883 KRTAP26-1Q6PEX3 210 aa9.22□□□□□ -0.93
CCM2-217ENST00000492883 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
CCM2-217ENST00000492883 SMCO4Q9NRQ5 59 aa9.22□□□□□ -0.93
CCM2-217ENST00000492883 FAT2Q9NYQ8 4349 aa9.22□□□□□ -0.93
CCM2-217ENST00000492883 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.93
CCM2-217ENST00000492883 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
CCM2-217ENST00000492883 NTN5Q8WTR8 489 aaPredicted RBP9.21□□□□□ -0.94
CCM2-217ENST00000492883 ALKBH7Q9BT30 221 aaPredicted RBP9.21□□□□□ -0.94
CCM2-217ENST00000492883 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
CCM2-217ENST00000492883 LINC00959A0A1B0GUT2 108 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 K7EMI3 77 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 SS18Q15532 418 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 C14orf177Q52M58 125 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 RNASE13Q5GAN3 156 aaKnown RBP9.2□□□□□ -0.94
CCM2-217ENST00000492883 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
CCM2-217ENST00000492883 SPANXA1Q9NS26 97 aa9.2□□□□□ -0.94
CCM2-217ENST00000492883 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
CCM2-217ENST00000492883 CCL25O15444 150 aa9.18□□□□□ -0.94
CCM2-217ENST00000492883 GCSHP23434 173 aa9.18□□□□□ -0.94
CCM2-217ENST00000492883 G0S2P27469 103 aa9.18□□□□□ -0.94
CCM2-217ENST00000492883 XCL1P47992 114 aa9.18□□□□□ -0.94
CCM2-217ENST00000492883 Q6ZUT4 128 aa9.18□□□□□ -0.94
CCM2-217ENST00000492883 OPRPNQ99935 248 aaPredicted RBP9.18□□□□□ -0.94
CCM2-217ENST00000492883 CYSLTR1Q9Y271 337 aa9.18□□□□□ -0.94
CCM2-217ENST00000492883 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
CCM2-217ENST00000492883 C2orf66Q6UXQ4 117 aa9.17□□□□□ -0.94
CCM2-217ENST00000492883 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
CCM2-217ENST00000492883 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
CCM2-217ENST00000492883 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
CCM2-217ENST00000492883 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
CCM2-217ENST00000492883 PYGO1Q9Y3Y4 419 aa9.16□□□□□ -0.94
CCM2-217ENST00000492883 PRSS1P07477 247 aa9.15□□□□□ -0.94
CCM2-217ENST00000492883 FOXI1Q12951 378 aa9.15□□□□□ -0.94
CCM2-217ENST00000492883 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
CCM2-217ENST00000492883 FA2HQ7L5A8 372 aa9.15□□□□□ -0.94
CCM2-217ENST00000492883 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
CCM2-217ENST00000492883 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
CCM2-217ENST00000492883 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
CCM2-217ENST00000492883 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
CCM2-217ENST00000492883 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
CCM2-217ENST00000492883 Q6ZN92 141 aa9.13□□□□□ -0.95
CCM2-217ENST00000492883 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
CCM2-217ENST00000492883 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
CCM2-217ENST00000492883 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
CCM2-217ENST00000492883 PKD1P98161 4303 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 TOMM6Q96B49 74 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 VCX2Q9H322 139 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
CCM2-217ENST00000492883 IGIPA6NJ69 53 aa9.11□□□□□ -0.95
CCM2-217ENST00000492883 LINC00614P0C842 121 aa9.11□□□□□ -0.95
CCM2-217ENST00000492883 MALP21145 153 aa9.11□□□□□ -0.95
CCM2-217ENST00000492883 LINC01620Q4KN68 170 aa9.11□□□□□ -0.95
CCM2-217ENST00000492883 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
CCM2-217ENST00000492883 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 COX7A2LO14548 114 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 NPSP0C0P6 89 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 RAB5BP61020 215 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 HIGD2BQ4VC39 106 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 PAPPA-AS1Q5QFB9 102 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
CCM2-217ENST00000492883 ERASQ7Z444 233 aa9.09□□□□□ -0.95
CCM2-217ENST00000492883 C5orf38Q86SI9 138 aa9.09□□□□□ -0.95
CCM2-217ENST00000492883 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
CCM2-217ENST00000492883 DNAH11Q96DT5 4516 aa9.09□□□□□ -0.95
CCM2-217ENST00000492883 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
CCM2-217ENST00000492883 COLCA2A8K830 154 aa9.08□□□□□ -0.96
CCM2-217ENST00000492883 TRGC2P03986 189 aa9.08□□□□□ -0.96
CCM2-217ENST00000492883 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
CCM2-217ENST00000492883 AMELXQ99217 191 aa9.08□□□□□ -0.96
CCM2-217ENST00000492883 GVQW2A0A096LPI5 108 aaPredicted RBP9.07□□□□□ -0.96
CCM2-217ENST00000492883 ZNF561-AS1K7EIQ3 104 aa9.07□□□□□ -0.96
CCM2-217ENST00000492883 SCO1O75880 301 aa9.07□□□□□ -0.96
CCM2-217ENST00000492883 C9orf163Q8N9P6 203 aa9.07□□□□□ -0.96
CCM2-217ENST00000492883 URB1-AS1Q96HZ7 61 aa9.07□□□□□ -0.96
CCM2-217ENST00000492883 IGHV3OR16-9A0A0B4J2B5 98 aa9.06□□□□□ -0.96
CCM2-217ENST00000492883 APOMO95445 188 aa9.06□□□□□ -0.96
CCM2-217ENST00000492883 SLPIP03973 132 aa9.06□□□□□ -0.96
CCM2-217ENST00000492883 UBE2D1P51668 147 aa9.06□□□□□ -0.96
CCM2-217ENST00000492883 CNBPP62633 177 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms