RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ENHOQ6UWT2 76 aa6.96□□□□□ -1.29
VPS8-225ENST00000492449 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.29
VPS8-225ENST00000492449 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 IGKV2-29A2NJV5 120 aaPredicted RBP6.96□□□□□ -1.3
VPS8-225ENST00000492449 SMIM1B2RUZ4 78 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 IGKV2D-28P01615 120 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 C1orf158Q8N1D5 194 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 FDCSPQ8NFU4 85 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 SMIM11BQ8TCY0 68 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 BLCAPP62952 87 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
VPS8-225ENST00000492449 COX6A2Q02221 97 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 MIR7-3HGQ8N6C7 128 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 SPTBN2O15020 2390 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 SPENQ96T58 3664 aaKnown RBP6.95□□□□□ -1.3
VPS8-225ENST00000492449 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 F8WEM9 126 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 C6orf226Q5I0X4 101 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 LINC00482Q8N8I6 264 aa6.95□□□□□ -1.3
VPS8-225ENST00000492449 SMG1Q96Q15 3661 aaKnown RBP6.94□□□□□ -1.3
VPS8-225ENST00000492449 IBA57-AS1B1ANH7 110 aa6.94□□□□□ -1.3
VPS8-225ENST00000492449 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
VPS8-225ENST00000492449 PLA2G2CQ5R387 149 aa6.94□□□□□ -1.3
VPS8-225ENST00000492449 PIK3CD-AS1Q5SR53 167 aa6.94□□□□□ -1.3
VPS8-225ENST00000492449 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
VPS8-225ENST00000492449 IGHV1OR15-1A0A075B7D0 117 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 LINC00467Q9BRT7 94 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 E7EQL1 145 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 LECT2O14960 151 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 IGHV3OR16-12A0A075B7B8 117 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 A0A0U1RRA0 63 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
VPS8-225ENST00000492449 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 RMI2Q96E14 147 aa6.93□□□□□ -1.3
VPS8-225ENST00000492449 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
VPS8-225ENST00000492449 G3V318 75 aa6.92□□□□□ -1.3
VPS8-225ENST00000492449 ZNF292O60281 2723 aa6.92□□□□□ -1.3
VPS8-225ENST00000492449 CNOT1A5YKK6 2376 aaKnown RBP6.91□□□□□ -1.3
VPS8-225ENST00000492449 MGAQ8IWI9 3026 aa6.91□□□□□ -1.3
VPS8-225ENST00000492449 SND1-IT1Q9HBX3 110 aa6.91□□□□□ -1.3
VPS8-225ENST00000492449 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
VPS8-225ENST00000492449 LAMA5O15230 3695 aa6.91□□□□□ -1.3
VPS8-225ENST00000492449 LY6G6DO95868 133 aa6.91□□□□□ -1.3
VPS8-225ENST00000492449 DMXL2Q8TDJ6 3036 aa6.91□□□□□ -1.3
VPS8-225ENST00000492449 Q6ZRU5 148 aa6.9□□□□□ -1.3
VPS8-225ENST00000492449 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.3
VPS8-225ENST00000492449 LYNX1G3V0Z9 82 aa6.9□□□□□ -1.3
VPS8-225ENST00000492449 LYNX1P0DP58 116 aa6.9□□□□□ -1.3
VPS8-225ENST00000492449 C11orf72Q8NBR9 251 aa6.9□□□□□ -1.3
VPS8-225ENST00000492449 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.31
VPS8-225ENST00000492449 ABCA4P78363 2273 aa6.9□□□□□ -1.31
VPS8-225ENST00000492449 PLAC8L1A1L4L8 177 aa6.9□□□□□ -1.31
VPS8-225ENST00000492449 ERC2-IT1O76042 136 aa6.9□□□□□ -1.31
VPS8-225ENST00000492449 NBL1P41271 181 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
VPS8-225ENST00000492449 PMAIP1Q13794 54 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
VPS8-225ENST00000492449 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 GVINP1Q7Z2Y8 2422 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 RHPN1-AS1Q9BWJ2 59 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 SPTBN4Q9H254 2564 aa6.89□□□□□ -1.31
VPS8-225ENST00000492449 DEFB124Q8NES8 71 aa6.88□□□□□ -1.31
VPS8-225ENST00000492449 CEP250Q9BV73 2442 aa6.88□□□□□ -1.31
VPS8-225ENST00000492449 Q8NA96 180 aa6.88□□□□□ -1.31
VPS8-225ENST00000492449 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 SLPIP03973 132 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 PROK1P58294 105 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 CXCL6P80162 114 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 TRAV10A0A0B4J240 114 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.87□□□□□ -1.31
VPS8-225ENST00000492449 MIFP14174 115 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 FAM229BQ4G0N7 80 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 C5orf56Q8N8D9 126 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 CSMD1Q96PZ7 3565 aa6.87□□□□□ -1.31
VPS8-225ENST00000492449 WNK2Q9Y3S1 2297 aa6.86□□□□□ -1.31
VPS8-225ENST00000492449 LOC110117498A0A087WWA1 95 aa6.86□□□□□ -1.31
VPS8-225ENST00000492449 LINC01547P58512 204 aaPredicted RBP6.86□□□□□ -1.31
VPS8-225ENST00000492449 H3BUA1 57 aa6.86□□□□□ -1.31
VPS8-225ENST00000492449 CCL18P55774 89 aa6.86□□□□□ -1.31
VPS8-225ENST00000492449 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
VPS8-225ENST00000492449 MAP1BP46821 2468 aaKnown RBP6.86□□□□□ -1.31
VPS8-225ENST00000492449 K7EMT4 169 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 USMG5Q96IX5 58 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
VPS8-225ENST00000492449 ESRGQ1W209 222 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 Q6ZQT0 140 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 Q6ZSN1 163 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 IL17DQ8TAD2 202 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 SIRPDQ9H106 197 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 Q9UF83 564 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 LOC400499M0QZD8 3231 aa6.85□□□□□ -1.31
VPS8-225ENST00000492449 RP1L1Q8IWN7 2480 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms