RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 C1orf43Q9BWL3 253 aa10.04□□□□□ -0.8
FDPS-213ENST00000489003 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
FDPS-213ENST00000489003 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
FDPS-213ENST00000489003 TRAV8-4A0A0B4J246 113 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 EREGO14944 169 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
FDPS-213ENST00000489003 WFDC2Q14508 124 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 DGAT2L7PQ6IED9 249 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 TMEM18Q96B42 140 aa10.03□□□□□ -0.8
FDPS-213ENST00000489003 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
FDPS-213ENST00000489003 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.81
FDPS-213ENST00000489003 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
FDPS-213ENST00000489003 ZNF664Q8N3J9 261 aa10.02□□□□□ -0.81
FDPS-213ENST00000489003 TIMM21Q9BVV7 248 aa10.02□□□□□ -0.81
FDPS-213ENST00000489003 NXT2Q9NPJ8 142 aaKnown RBP10.02□□□□□ -0.81
FDPS-213ENST00000489003 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.818e-9■■□□□ 13.1
FDPS-213ENST00000489003 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
FDPS-213ENST00000489003 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
FDPS-213ENST00000489003 LECT2O14960 151 aa10□□□□□ -0.81
FDPS-213ENST00000489003 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
FDPS-213ENST00000489003 PGPEP1Q9NXJ5 209 aa10□□□□□ -0.81
FDPS-213ENST00000489003 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
FDPS-213ENST00000489003 K7EMI3 77 aa9.99□□□□□ -0.81
FDPS-213ENST00000489003 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
FDPS-213ENST00000489003 Q8N814 137 aa9.99□□□□□ -0.81
FDPS-213ENST00000489003 OPRPNQ99935 248 aaPredicted RBP9.99□□□□□ -0.81
FDPS-213ENST00000489003 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
FDPS-213ENST00000489003 PKHD1P08F94 4074 aa9.98□□□□□ -0.81
FDPS-213ENST00000489003 GAGE12HA6NDE8 117 aa9.97□□□□□ -0.81
FDPS-213ENST00000489003 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
FDPS-213ENST00000489003 COLCA2A8K830 154 aa9.97□□□□□ -0.81
FDPS-213ENST00000489003 RNASE13Q5GAN3 156 aaKnown RBP9.97□□□□□ -0.81
FDPS-213ENST00000489003 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
FDPS-213ENST00000489003 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
FDPS-213ENST00000489003 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
FDPS-213ENST00000489003 MRPS36P82909 103 aaKnown RBP9.96□□□□□ -0.82
FDPS-213ENST00000489003 C2orf66Q6UXQ4 117 aa9.96□□□□□ -0.82
FDPS-213ENST00000489003 Q6ZUT4 128 aa9.96□□□□□ -0.82
FDPS-213ENST00000489003 C18orf32Q8TCD1 76 aa9.96□□□□□ -0.82
FDPS-213ENST00000489003 PYGO1Q9Y3Y4 419 aa9.96□□□□□ -0.82
FDPS-213ENST00000489003 SCO1O75880 301 aa9.95□□□□□ -0.82
FDPS-213ENST00000489003 SS18Q15532 418 aa9.95□□□□□ -0.82
FDPS-213ENST00000489003 CYSLTR1Q9Y271 337 aa9.95□□□□□ -0.82
FDPS-213ENST00000489003 USP17L23D6RBM5 183 aa9.94□□□□□ -0.82
FDPS-213ENST00000489003 CCL25O15444 150 aa9.94□□□□□ -0.82
FDPS-213ENST00000489003 URB1-AS1Q96HZ7 61 aa9.94□□□□□ -0.82
FDPS-213ENST00000489003 DNAH8Q96JB1 4490 aa9.94□□□□□ -0.82
FDPS-213ENST00000489003 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 IGIPA6NJ69 53 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 C1orf196B1AJZ1 125 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 G0S2P27469 103 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 XCL1P47992 114 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 FOXI1Q12951 378 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 FA2HQ7L5A8 372 aa9.93□□□□□ -0.82
FDPS-213ENST00000489003 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
FDPS-213ENST00000489003 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
FDPS-213ENST00000489003 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
FDPS-213ENST00000489003 TRGC2P03986 189 aa9.92□□□□□ -0.82
FDPS-213ENST00000489003 LINC00614P0C842 121 aa9.92□□□□□ -0.82
FDPS-213ENST00000489003 NTN5Q8WTR8 489 aaPredicted RBP9.92□□□□□ -0.82
FDPS-213ENST00000489003 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
FDPS-213ENST00000489003 PRSS1P07477 247 aa9.91□□□□□ -0.82
FDPS-213ENST00000489003 C14orf177Q52M58 125 aa9.91□□□□□ -0.82
FDPS-213ENST00000489003 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
FDPS-213ENST00000489003 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
FDPS-213ENST00000489003 KIAA1109Q2LD37 5005 aa9.91□□□□□ -0.82
FDPS-213ENST00000489003 ZC2HC1BQ5TFG8 222 aa9.9□□□□□ -0.82
FDPS-213ENST00000489003 APOBP04114 4563 aaKnown RBP9.89□□□□□ -0.83
FDPS-213ENST00000489003 GCSHP23434 173 aa9.89□□□□□ -0.83
FDPS-213ENST00000489003 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
FDPS-213ENST00000489003 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
FDPS-213ENST00000489003 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
FDPS-213ENST00000489003 AMELXQ99217 191 aa9.89□□□□□ -0.83
FDPS-213ENST00000489003 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
FDPS-213ENST00000489003 IFITM10A6NMD0 228 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 NPSP0C0P6 89 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 RAB5BP61020 215 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 ERASQ7Z444 233 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 VCX2Q9H322 139 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 RYR1P21817 5038 aa9.88□□□□□ -0.83
FDPS-213ENST00000489003 A0A096LNJ9 63 aa9.87□□□□□ -0.83
FDPS-213ENST00000489003 TEX43Q6ZNM6 134 aa9.87□□□□□ -0.83
FDPS-213ENST00000489003 LINC00173Q6ZV60 143 aa9.87□□□□□ -0.83
FDPS-213ENST00000489003 hDV102S1A0JD36 115 aa9.86□□□□□ -0.83
FDPS-213ENST00000489003 LINC01549A6NIU2 74 aa9.86□□□□□ -0.83
FDPS-213ENST00000489003 SLPIP03973 132 aa9.86□□□□□ -0.83
FDPS-213ENST00000489003 S100A1P23297 94 aa9.86□□□□□ -0.83
FDPS-213ENST00000489003 Q6ZN92 141 aa9.86□□□□□ -0.83
FDPS-213ENST00000489003 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
FDPS-213ENST00000489003 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
FDPS-213ENST00000489003 IGHV1-58A0A0C4DH39 117 aa9.85□□□□□ -0.83
FDPS-213ENST00000489003 COX7A2LO14548 114 aa9.85□□□□□ -0.83
FDPS-213ENST00000489003 UBE2D1P51668 147 aa9.85□□□□□ -0.83
FDPS-213ENST00000489003 COX6A2Q02221 97 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms