RNA–Protein interactions for RNA: ENST00000485682.6

TSSC4-209, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-209ENST00000485682 SVBPQ8N300 66 aa11.51□□□□□ -0.57
TSSC4-209ENST00000485682 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
TSSC4-209ENST00000485682 SMAGPQ0VAQ4 97 aa11.5□□□□□ -0.57
TSSC4-209ENST00000485682 CDC42SE2Q9NRR3 84 aa11.5□□□□□ -0.57
TSSC4-209ENST00000485682 CSDC2Q9Y534 153 aaKnown RBP11.5□□□□□ -0.57
TSSC4-209ENST00000485682 RYR1P21817 5038 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 APOBP04114 4563 aaKnown RBP11.49□□□□□ -0.57
TSSC4-209ENST00000485682 GCSHP23434 173 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 COX19Q49B96 90 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 DGAT2L7PQ6IED9 249 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 UBE2D4Q9Y2X8 147 aa11.49□□□□□ -0.57
TSSC4-209ENST00000485682 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
TSSC4-209ENST00000485682 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
TSSC4-209ENST00000485682 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
TSSC4-209ENST00000485682 ZNF664Q8N3J9 261 aa11.48□□□□□ -0.57
TSSC4-209ENST00000485682 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
TSSC4-209ENST00000485682 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
TSSC4-209ENST00000485682 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
TSSC4-209ENST00000485682 LOC389332A0A1B0GUA5 103 aa11.47□□□□□ -0.57
TSSC4-209ENST00000485682 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
TSSC4-209ENST00000485682 RAB5AP20339 215 aa11.47□□□□□ -0.57
TSSC4-209ENST00000485682 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
TSSC4-209ENST00000485682 Q8N8P6 123 aa11.46□□□□□ -0.57
TSSC4-209ENST00000485682 MT-ND6P03923 174 aa11.45□□□□□ -0.58
TSSC4-209ENST00000485682 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
TSSC4-209ENST00000485682 KIAA1644Q3SXP7 199 aa11.45□□□□□ -0.58
TSSC4-209ENST00000485682 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
TSSC4-209ENST00000485682 LINC00959A0A1B0GUT2 108 aa11.44□□□□□ -0.58
TSSC4-209ENST00000485682 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
TSSC4-209ENST00000485682 HSPG2P98160 4391 aa11.44□□□□□ -0.58
TSSC4-209ENST00000485682 PRSS1P07477 247 aa11.43□□□□□ -0.58
TSSC4-209ENST00000485682 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
TSSC4-209ENST00000485682 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
TSSC4-209ENST00000485682 TGIF2-C20orf24A0A0A6YYL0 155 aa11.42□□□□□ -0.58
TSSC4-209ENST00000485682 K7EMI3 77 aa11.42□□□□□ -0.58
TSSC4-209ENST00000485682 SS18Q15532 418 aa11.42□□□□□ -0.58
TSSC4-209ENST00000485682 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
TSSC4-209ENST00000485682 DNAH8Q96JB1 4490 aa11.41□□□□□ -0.58
TSSC4-209ENST00000485682 CCL25O15444 150 aa11.41□□□□□ -0.58
TSSC4-209ENST00000485682 Q6ZUT4 128 aa11.41□□□□□ -0.58
TSSC4-209ENST00000485682 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
TSSC4-209ENST00000485682 ALKBH7Q9BT30 221 aaPredicted RBP11.41□□□□□ -0.58
TSSC4-209ENST00000485682 MRPL18Q9H0U6 180 aaKnown RBP11.41□□□□□ -0.58
TSSC4-209ENST00000485682 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
TSSC4-209ENST00000485682 XCL1P47992 114 aa11.4□□□□□ -0.58
TSSC4-209ENST00000485682 MRPS36P82909 103 aaKnown RBP11.4□□□□□ -0.58
TSSC4-209ENST00000485682 FABP9Q0Z7S8 132 aa11.4□□□□□ -0.58
TSSC4-209ENST00000485682 FOXI1Q12951 378 aa11.4□□□□□ -0.58
TSSC4-209ENST00000485682 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
TSSC4-209ENST00000485682 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
TSSC4-209ENST00000485682 C1orf196B1AJZ1 125 aa11.39□□□□□ -0.59
TSSC4-209ENST00000485682 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
TSSC4-209ENST00000485682 CD164L2Q6UWJ8 174 aa11.39□□□□□ -0.59
TSSC4-209ENST00000485682 PYGO1Q9Y3Y4 419 aa11.39□□□□□ -0.59
TSSC4-209ENST00000485682 OPRPNQ99935 248 aaPredicted RBP11.38□□□□□ -0.59
TSSC4-209ENST00000485682 TRAV13-1A0A0B4J241 112 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 XGP55808 180 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 C2orf66Q6UXQ4 117 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
TSSC4-209ENST00000485682 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
TSSC4-209ENST00000485682 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
TSSC4-209ENST00000485682 YPEL4Q96NS1 127 aa11.36□□□□□ -0.59
TSSC4-209ENST00000485682 G0S2P27469 103 aa11.35□□□□□ -0.59
TSSC4-209ENST00000485682 CNBPP62633 177 aaKnown RBP11.35□□□□□ -0.59
TSSC4-209ENST00000485682 AP5S1Q9NUS5 200 aa11.35□□□□□ -0.59
TSSC4-209ENST00000485682 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
TSSC4-209ENST00000485682 IGLV4-3A0A075B6K6 122 aa11.34□□□□□ -0.59
TSSC4-209ENST00000485682 C9orf163Q8N9P6 203 aa11.34□□□□□ -0.59
TSSC4-209ENST00000485682 SMCO4Q9NRQ5 59 aa11.34□□□□□ -0.59
TSSC4-209ENST00000485682 GVQW2A0A096LPI5 108 aaPredicted RBP11.33□□□□□ -0.6
TSSC4-209ENST00000485682 LINC01546A6NGU7 62 aa11.33□□□□□ -0.6
TSSC4-209ENST00000485682 SLPIP03973 132 aa11.33□□□□□ -0.6
TSSC4-209ENST00000485682 Q6ZSA8 131 aa11.33□□□□□ -0.6
TSSC4-209ENST00000485682 TMEM141Q96I45 108 aa11.33□□□□□ -0.6
TSSC4-209ENST00000485682 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
TSSC4-209ENST00000485682 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
TSSC4-209ENST00000485682 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
TSSC4-209ENST00000485682 NPSP0C0P6 89 aa11.32□□□□□ -0.6
TSSC4-209ENST00000485682 KRTAP17-1Q9BYP8 105 aa11.32□□□□□ -0.6
TSSC4-209ENST00000485682 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.31□□□□□ -0.6
TSSC4-209ENST00000485682 COX7A2LO14548 114 aa11.31□□□□□ -0.6
TSSC4-209ENST00000485682 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
TSSC4-209ENST00000485682 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
TSSC4-209ENST00000485682 TOMM6Q96B49 74 aa11.31□□□□□ -0.6
TSSC4-209ENST00000485682 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
TSSC4-209ENST00000485682 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
TSSC4-209ENST00000485682 MALP21145 153 aa11.29□□□□□ -0.6
TSSC4-209ENST00000485682 Q6ZN92 141 aa11.29□□□□□ -0.6
TSSC4-209ENST00000485682 Q8N1X5 172 aa11.29□□□□□ -0.6
TSSC4-209ENST00000485682 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
TSSC4-209ENST00000485682 AMELXQ99217 191 aa11.29□□□□□ -0.6
TSSC4-209ENST00000485682 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
TSSC4-209ENST00000485682 FAT1Q14517 4588 aa11.28□□□□□ -0.6
TSSC4-209ENST00000485682 IGHV3OR16-9A0A0B4J2B5 98 aa11.28□□□□□ -0.6
TSSC4-209ENST00000485682 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms