RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ARMS2P0C7Q2 107 aa2.56□□□□□ -2
R3HDM1-216ENST00000483065 ZNF563Q8TA94 476 aa2.56□□□□□ -2
R3HDM1-216ENST00000483065 CTTNBP2Q8WZ74 1663 aa2.56□□□□□ -2
R3HDM1-216ENST00000483065 MED12LQ86YW9 2145 aa2.56□□□□□ -2
R3HDM1-216ENST00000483065 A0A087WWC5 75 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 C7orf77A4D0Y5 90 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 D6R8Y8 96 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 M0R135 149 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 CACNA1DQ01668 2161 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 CHD3Q12873 2000 aaKnown RBP2.55□□□□□ -2
R3HDM1-216ENST00000483065 SDK2Q58EX2 2172 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 MAGI3Q5TCQ9 1506 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 MUSTN1Q8IVN3 82 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 SHROOM3Q8TF72 1996 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 RREB1Q92766 1687 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 LRRIQ1Q96JM4 1722 aa2.55□□□□□ -2
R3HDM1-216ENST00000483065 PCNX2A6NKB5 2137 aa2.54□□□□□ -2
R3HDM1-216ENST00000483065 KIF21AQ7Z4S6 1674 aa2.54□□□□□ -2
R3HDM1-216ENST00000483065 ATP5EP2Q5VTU8 51 aa2.54□□□□□ -2
R3HDM1-216ENST00000483065 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
R3HDM1-216ENST00000483065 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
R3HDM1-216ENST00000483065 DOCK2Q92608 1830 aa2.54□□□□□ -2
R3HDM1-216ENST00000483065 SETBP1Q9Y6X0 1596 aa2.53□□□□□ -2
R3HDM1-216ENST00000483065 CUX1P39880 1505 aa2.53□□□□□ -2
R3HDM1-216ENST00000483065 DIDO1Q9BTC0 2240 aaKnown RBP2.53□□□□□ -2
R3HDM1-216ENST00000483065 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.53□□□□□ -2
R3HDM1-216ENST00000483065 IQCF6A8MYZ5 107 aa2.53□□□□□ -2
R3HDM1-216ENST00000483065 DEFB121Q5J5C9 76 aa2.53□□□□□ -2
R3HDM1-216ENST00000483065 LINC00846Q9NV44 126 aa2.53□□□□□ -2
R3HDM1-216ENST00000483065 NEXMIFQ5QGS0 1516 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 PSME4Q14997 1843 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 C10orf99Q6UWK7 81 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 C6orf201Q7Z4U5 140 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 LINC00208Q96KT6 92 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 COL4A6Q14031 1691 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 MICAL3Q7RTP6 2002 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 INO80Q9ULG1 1556 aaPredicted RBP2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 EFCAB5A4FU69 1503 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 CDK13Q14004 1512 aaKnown RBP2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 PLXNA1Q9UIW2 1896 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 LTBP2Q14767 1821 aa2.52□□□□□ -2.01
R3HDM1-216ENST00000483065 BRWD1Q9NSI6 2320 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 PTPRDP23468 1912 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 TCHHQ07283 1943 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 CCL19Q99731 98 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 PSENENQ9NZ42 101 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 SCN11AQ9UI33 1791 aa2.51□□□□□ -2.01
R3HDM1-216ENST00000483065 MROH1Q8NDA8 1641 aa2.5□□□□□ -2.01
R3HDM1-216ENST00000483065 A0A087WTM6 91 aa2.5□□□□□ -2.01
R3HDM1-216ENST00000483065 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
R3HDM1-216ENST00000483065 CEP192Q8TEP8 1941 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 TRAV1-2A0A0B4J238 106 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 ACYP2P14621 99 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 Q6JHZ5 121 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 BRD3OSQ6XYD6 125 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 NKTRP30414 1462 aaKnown RBP2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 NINQ8N4C6 2090 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 CASP8AP2Q9UKL3 1982 aa2.49□□□□□ -2.01
R3HDM1-216ENST00000483065 ZNF137PP52743 207 aa2.48□□□□□ -2.01
R3HDM1-216ENST00000483065 SPINK13Q1W4C9 94 aa2.48□□□□□ -2.01
R3HDM1-216ENST00000483065 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
R3HDM1-216ENST00000483065 MYO18AQ92614 2054 aaKnown RBP2.48□□□□□ -2.01
R3HDM1-216ENST00000483065 MYOFQ9NZM1 2061 aa2.48□□□□□ -2.01
R3HDM1-216ENST00000483065 PPRC1Q5VV67 1664 aaKnown RBP2.47□□□□□ -2.01
R3HDM1-216ENST00000483065 TRBV30A0A0K0K1B3 111 aa2.47□□□□□ -2.01
R3HDM1-216ENST00000483065 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
R3HDM1-216ENST00000483065 THOC2Q8NI27 1593 aaKnown RBP2.47□□□□□ -2.01
R3HDM1-216ENST00000483065 RP1P56715 2156 aa2.47□□□□□ -2.01
R3HDM1-216ENST00000483065 ARHGEF5Q12774 1597 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 TRGV1A0A0A0MS02 117 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 M0R3E3 92 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 ZGRF1Q86YA3 2104 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 TMEM263Q8WUH6 116 aaKnown RBP2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 UBE2D4Q9Y2X8 147 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 SPAG17Q6Q759 2223 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 STRCP1A6NGW2 1772 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 RGPD8O14715 1765 aaPredicted RBP2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 RGPD5Q99666 1765 aa2.46□□□□□ -2.02
R3HDM1-216ENST00000483065 PRRC2AP48634 2157 aaKnown RBP2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 A0A087WXM4 84 aa2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 IFI27P40305 119 aaPredicted RBP2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 SMIM5Q71RC9 77 aa2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 Q96NJ1 140 aa2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 SPRR4Q96PI1 79 aa2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 NUMA1Q14980 2115 aa2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 COL5A3P25940 1745 aaPredicted RBP2.45□□□□□ -2.02
R3HDM1-216ENST00000483065 BAZ2BQ9UIF8 2168 aaKnown RBP2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 IQGAP3Q86VI3 1631 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 A0A1B0GUT8 65 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 NCR3O14931 201 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 NDUFB1O75438 58 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 PRB2P02812 416 aaPredicted RBP2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 GCHFRP30047 84 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 DEFB103AP81534 67 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 HEATR1Q9H583 2144 aaKnown RBP2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 LTN1O94822 1766 aa2.44□□□□□ -2.02
R3HDM1-216ENST00000483065 URB2Q14146 1524 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms