RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
CTSA-206ENST00000480961 FABP9Q0Z7S8 132 aa13.45□□□□□ -0.26
CTSA-206ENST00000480961 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
CTSA-206ENST00000480961 MRPL52Q86TS9 123 aaKnown RBP13.45□□□□□ -0.26
CTSA-206ENST00000480961 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
CTSA-206ENST00000480961 PRSS47A8MTI9 375 aa13.44□□□□□ -0.26
CTSA-206ENST00000480961 DGAT2L7PQ6IED9 249 aa13.44□□□□□ -0.26
CTSA-206ENST00000480961 Q8N814 137 aa13.44□□□□□ -0.26
CTSA-206ENST00000480961 COX19Q49B96 90 aa13.43□□□□□ -0.26
CTSA-206ENST00000480961 RNASE13Q5GAN3 156 aaKnown RBP13.43□□□□□ -0.26
CTSA-206ENST00000480961 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
CTSA-206ENST00000480961 Q8N8P6 123 aa13.43□□□□□ -0.26
CTSA-206ENST00000480961 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
CTSA-206ENST00000480961 UBE2D4Q9Y2X8 147 aa13.43□□□□□ -0.26
CTSA-206ENST00000480961 IFI27P40305 119 aaPredicted RBP13.42□□□□□ -0.26
CTSA-206ENST00000480961 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
CTSA-206ENST00000480961 YPEL4Q96NS1 127 aa13.42□□□□□ -0.26
CTSA-206ENST00000480961 ALKBH7Q9BT30 221 aaPredicted RBP13.42□□□□□ -0.26
CTSA-206ENST00000480961 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
CTSA-206ENST00000480961 APOBP04114 4563 aaKnown RBP13.42□□□□□ -0.26
CTSA-206ENST00000480961 TRAV8-4A0A0B4J246 113 aa13.41□□□□□ -0.26
CTSA-206ENST00000480961 MT-ND6P03923 174 aa13.41□□□□□ -0.26
CTSA-206ENST00000480961 TMEM18Q96B42 140 aa13.41□□□□□ -0.26
CTSA-206ENST00000480961 TRAPPC1Q9Y5R8 145 aa13.41□□□□□ -0.26
CTSA-206ENST00000480961 GAGE12HA6NDE8 117 aa13.4□□□□□ -0.26
CTSA-206ENST00000480961 OPRPNQ99935 248 aaPredicted RBP13.4□□□□□ -0.26
CTSA-206ENST00000480961 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.39□□□□□ -0.27
CTSA-206ENST00000480961 Q6ZUT4 128 aa13.39□□□□□ -0.27
CTSA-206ENST00000480961 SMCO4Q9NRQ5 59 aa13.39□□□□□ -0.27
CTSA-206ENST00000480961 USP17L23D6RBM5 183 aa13.38□□□□□ -0.27
CTSA-206ENST00000480961 CHCHD10Q8WYQ3 142 aaPredicted RBP13.38□□□□□ -0.27
CTSA-206ENST00000480961 NXT2Q9NPJ8 142 aaKnown RBP13.38□□□□□ -0.27
CTSA-206ENST00000480961 RYR1P21817 5038 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 IGLV5-52A0A0A0MRZ9 124 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 LINC00959A0A1B0GUT2 108 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 PRSS3P2Q8NHM4 247 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 TIMM21Q9BVV7 248 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 CSDC2Q9Y534 153 aaKnown RBP13.37□□□□□ -0.27
CTSA-206ENST00000480961 DNAH8Q96JB1 4490 aa13.37□□□□□ -0.27
CTSA-206ENST00000480961 HERC2O95714 4834 aa13.36□□□□□ -0.27
CTSA-206ENST00000480961 XCL1P47992 114 aa13.36□□□□□ -0.27
CTSA-206ENST00000480961 FAM104AQ969W3 186 aa13.36□□□□□ -0.27
CTSA-206ENST00000480961 SPANXA1Q9NS26 97 aa13.35□□□□□ -0.27
CTSA-206ENST00000480961 HSPG2P98160 4391 aa13.34□□□□□ -0.27
CTSA-206ENST00000480961 TRAV13-1A0A0B4J241 112 aa13.34□□□□□ -0.27
CTSA-206ENST00000480961 CCL25O15444 150 aa13.34□□□□□ -0.27
CTSA-206ENST00000480961 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
CTSA-206ENST00000480961 CDPF1Q6NVV7 123 aa13.34□□□□□ -0.27
CTSA-206ENST00000480961 KRTAP10-1P60331 282 aa13.33□□□□□ -0.28
CTSA-206ENST00000480961 SS18Q15532 418 aa13.33□□□□□ -0.28
CTSA-206ENST00000480961 C2orf66Q6UXQ4 117 aa13.33□□□□□ -0.28
CTSA-206ENST00000480961 NTN5Q8WTR8 489 aaPredicted RBP13.33□□□□□ -0.28
CTSA-206ENST00000480961 PRSS1P07477 247 aa13.32□□□□□ -0.28
CTSA-206ENST00000480961 GCSHP23434 173 aa13.32□□□□□ -0.28
CTSA-206ENST00000480961 FOXI1Q12951 378 aa13.32□□□□□ -0.28
CTSA-206ENST00000480961 CYSLTR1Q9Y271 337 aa13.32□□□□□ -0.28
CTSA-206ENST00000480961 LINC01620Q4KN68 170 aa13.31□□□□□ -0.28
CTSA-206ENST00000480961 K7EMI3 77 aa13.3□□□□□ -0.28
CTSA-206ENST00000480961 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
CTSA-206ENST00000480961 C14orf177Q52M58 125 aa13.3□□□□□ -0.28
CTSA-206ENST00000480961 ZC2HC1BQ5TFG8 222 aa13.3□□□□□ -0.28
CTSA-206ENST00000480961 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
CTSA-206ENST00000480961 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
CTSA-206ENST00000480961 SCO1O75880 301 aa13.29□□□□□ -0.28
CTSA-206ENST00000480961 PYGO1Q9Y3Y4 419 aa13.29□□□□□ -0.28
CTSA-206ENST00000480961 IFITM10A6NMD0 228 aa13.28□□□□□ -0.28
CTSA-206ENST00000480961 C1orf196B1AJZ1 125 aa13.28□□□□□ -0.28
CTSA-206ENST00000480961 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
CTSA-206ENST00000480961 hDV102S1A0JD36 115 aa13.27□□□□□ -0.29
CTSA-206ENST00000480961 CD164L2Q6UWJ8 174 aa13.27□□□□□ -0.29
CTSA-206ENST00000480961 C15orf56Q8N910 161 aa13.27□□□□□ -0.29
CTSA-206ENST00000480961 LINC01546A6NGU7 62 aa13.26□□□□□ -0.29
CTSA-206ENST00000480961 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
CTSA-206ENST00000480961 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
CTSA-206ENST00000480961 TOMM6Q96B49 74 aa13.26□□□□□ -0.29
CTSA-206ENST00000480961 URB1-AS1Q96HZ7 61 aa13.26□□□□□ -0.29
CTSA-206ENST00000480961 TMEM141Q96I45 108 aa13.25□□□□□ -0.29
CTSA-206ENST00000480961 COLCA2A8K830 154 aa13.24□□□□□ -0.29
CTSA-206ENST00000480961 CFAP161Q6P656 301 aa13.24□□□□□ -0.29
CTSA-206ENST00000480961 C5orf38Q86SI9 138 aa13.24□□□□□ -0.29
CTSA-206ENST00000480961 TRGC2P03986 189 aa13.23□□□□□ -0.29
CTSA-206ENST00000480961 G0S2P27469 103 aa13.23□□□□□ -0.29
CTSA-206ENST00000480961 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
CTSA-206ENST00000480961 SLPIP03973 132 aa13.22□□□□□ -0.29
CTSA-206ENST00000480961 LINC00614P0C842 121 aa13.22□□□□□ -0.29
CTSA-206ENST00000480961 TEX43Q6ZNM6 134 aa13.22□□□□□ -0.29
CTSA-206ENST00000480961 VCX2Q9H322 139 aa13.22□□□□□ -0.29
CTSA-206ENST00000480961 COX7A2LO14548 114 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 HAMPP81172 84 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 PMCHL1Q16048 86 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 Q6ZN92 141 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 LINC00173Q6ZV60 143 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 LINC00526Q96FQ7 95 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
CTSA-206ENST00000480961 MALP21145 153 aa13.2□□□□□ -0.3
CTSA-206ENST00000480961 AMELXQ99217 191 aa13.2□□□□□ -0.3
CTSA-206ENST00000480961 IGHV1-58A0A0C4DH39 117 aa13.19□□□□□ -0.3
CTSA-206ENST00000480961 CDK2AP2O75956 126 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms