RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 YPEL4Q96NS1 127 aa10.04□□□□□ -0.8
ABCF3-213ENST00000480539 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
ABCF3-213ENST00000480539 RAB5AP20339 215 aa10.03□□□□□ -0.8
ABCF3-213ENST00000480539 Q8N8P6 123 aa10.03□□□□□ -0.8
ABCF3-213ENST00000480539 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
ABCF3-213ENST00000480539 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
ABCF3-213ENST00000480539 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-213ENST00000480539 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
ABCF3-213ENST00000480539 Q6ZUT4 128 aa10.02□□□□□ -0.81
ABCF3-213ENST00000480539 TMEM18Q96B42 140 aa10.02□□□□□ -0.81
ABCF3-213ENST00000480539 ALKBH7Q9BT30 221 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-213ENST00000480539 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
ABCF3-213ENST00000480539 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
ABCF3-213ENST00000480539 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.81
ABCF3-213ENST00000480539 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
ABCF3-213ENST00000480539 Q8N814 137 aa10.01□□□□□ -0.81
ABCF3-213ENST00000480539 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
ABCF3-213ENST00000480539 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
ABCF3-213ENST00000480539 C16orf90A8MZG2 172 aa10□□□□□ -0.81
ABCF3-213ENST00000480539 SMAGPQ0VAQ4 97 aa10□□□□□ -0.81
ABCF3-213ENST00000480539 KRTAP26-1Q6PEX3 210 aa10□□□□□ -0.81
ABCF3-213ENST00000480539 ZNF664Q8N3J9 261 aa10□□□□□ -0.81
ABCF3-213ENST00000480539 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
ABCF3-213ENST00000480539 TRAV8-4A0A0B4J246 113 aa9.99□□□□□ -0.81
ABCF3-213ENST00000480539 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
ABCF3-213ENST00000480539 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
ABCF3-213ENST00000480539 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
ABCF3-213ENST00000480539 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
ABCF3-213ENST00000480539 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
ABCF3-213ENST00000480539 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.97□□□□□ -0.81
ABCF3-213ENST00000480539 GAGE12HA6NDE8 117 aa9.97□□□□□ -0.81
ABCF3-213ENST00000480539 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
ABCF3-213ENST00000480539 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
ABCF3-213ENST00000480539 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
ABCF3-213ENST00000480539 OPRPNQ99935 248 aaPredicted RBP9.97□□□□□ -0.81
ABCF3-213ENST00000480539 CYSLTR1Q9Y271 337 aa9.97□□□□□ -0.81
ABCF3-213ENST00000480539 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.82
ABCF3-213ENST00000480539 CCL25O15444 150 aa9.96□□□□□ -0.82
ABCF3-213ENST00000480539 SCO1O75880 301 aa9.96□□□□□ -0.82
ABCF3-213ENST00000480539 XCL1P47992 114 aa9.96□□□□□ -0.82
ABCF3-213ENST00000480539 IGLV5-52A0A0A0MRZ9 124 aa9.95□□□□□ -0.82
ABCF3-213ENST00000480539 K7EMI3 77 aa9.95□□□□□ -0.82
ABCF3-213ENST00000480539 CDPF1Q6NVV7 123 aa9.95□□□□□ -0.82
ABCF3-213ENST00000480539 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
ABCF3-213ENST00000480539 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
ABCF3-213ENST00000480539 LRP1BQ9NZR2 4599 aa9.94□□□□□ -0.82
ABCF3-213ENST00000480539 IGLV4-3A0A075B6K6 122 aa9.94□□□□□ -0.82
ABCF3-213ENST00000480539 TRAV13-1A0A0B4J241 112 aa9.94□□□□□ -0.82
ABCF3-213ENST00000480539 SS18Q15532 418 aa9.94□□□□□ -0.82
ABCF3-213ENST00000480539 C18orf32Q8TCD1 76 aa9.94□□□□□ -0.82
ABCF3-213ENST00000480539 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
ABCF3-213ENST00000480539 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
ABCF3-213ENST00000480539 IFITM10A6NMD0 228 aa9.93□□□□□ -0.82
ABCF3-213ENST00000480539 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
ABCF3-213ENST00000480539 FOXI1Q12951 378 aa9.93□□□□□ -0.82
ABCF3-213ENST00000480539 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
ABCF3-213ENST00000480539 C14orf177Q52M58 125 aa9.92□□□□□ -0.82
ABCF3-213ENST00000480539 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
ABCF3-213ENST00000480539 PRSS1P07477 247 aa9.91□□□□□ -0.82
ABCF3-213ENST00000480539 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
ABCF3-213ENST00000480539 URB1-AS1Q96HZ7 61 aa9.91□□□□□ -0.82
ABCF3-213ENST00000480539 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
ABCF3-213ENST00000480539 COLCA2A8K830 154 aa9.9□□□□□ -0.82
ABCF3-213ENST00000480539 C1orf196B1AJZ1 125 aa9.9□□□□□ -0.82
ABCF3-213ENST00000480539 ZC2HC1BQ5TFG8 222 aa9.9□□□□□ -0.82
ABCF3-213ENST00000480539 C15orf56Q8N910 161 aa9.9□□□□□ -0.82
ABCF3-213ENST00000480539 AP5S1Q9NUS5 200 aa9.9□□□□□ -0.82
ABCF3-213ENST00000480539 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 TRGC2P03986 189 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 GCSHP23434 173 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 CD164L2Q6UWJ8 174 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 Q6ZN92 141 aa9.89□□□□□ -0.83
ABCF3-213ENST00000480539 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
ABCF3-213ENST00000480539 G0S2P27469 103 aa9.88□□□□□ -0.83
ABCF3-213ENST00000480539 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
ABCF3-213ENST00000480539 TEX43Q6ZNM6 134 aa9.88□□□□□ -0.83
ABCF3-213ENST00000480539 LINC00173Q6ZV60 143 aa9.88□□□□□ -0.83
ABCF3-213ENST00000480539 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
ABCF3-213ENST00000480539 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
ABCF3-213ENST00000480539 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
ABCF3-213ENST00000480539 A0A096LNJ9 63 aa9.86□□□□□ -0.83
ABCF3-213ENST00000480539 COX7A2LO14548 114 aa9.86□□□□□ -0.83
ABCF3-213ENST00000480539 LINC00614P0C842 121 aa9.86□□□□□ -0.83
ABCF3-213ENST00000480539 AMELXQ99217 191 aa9.86□□□□□ -0.83
ABCF3-213ENST00000480539 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
ABCF3-213ENST00000480539 ATP6V1G1O75348 118 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 NPSP0C0P6 89 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 RAB5BP61020 215 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 ERASQ7Z444 233 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 VCX2Q9H322 139 aa9.85□□□□□ -0.83
ABCF3-213ENST00000480539 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
ABCF3-213ENST00000480539 GVQW2A0A096LPI5 108 aaPredicted RBP9.84□□□□□ -0.83
ABCF3-213ENST00000480539 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
ABCF3-213ENST00000480539 MALP21145 153 aa9.84□□□□□ -0.83
ABCF3-213ENST00000480539 UBE2D1P51668 147 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms