RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 TMEM141Q96I45 108 aa7.97□□□□□ -1.13
TRAPPC12-219ENST00000479955 SCGB3A1Q96QR1 104 aa7.97□□□□□ -1.13
TRAPPC12-219ENST00000479955 TIMM17AQ99595 171 aa7.97□□□□□ -1.13
TRAPPC12-219ENST00000479955 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
TRAPPC12-219ENST00000479955 KLK12Q9UKR0 248 aa7.97□□□□□ -1.13
TRAPPC12-219ENST00000479955 ATP5LO75964 103 aa7.96□□□□□ -1.14
TRAPPC12-219ENST00000479955 S100A6P06703 90 aa7.96□□□□□ -1.14
TRAPPC12-219ENST00000479955 IGLV4-60A0A075B6I1 120 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 IGIPA6NJ69 53 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 CCL25O15444 150 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 REG3AQ06141 175 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 MIAQ16674 131 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 LINC00269Q8N2A0 174 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 RMI2Q96E14 147 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 VCX2Q9H322 139 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 PRR34Q9NV39 138 aa7.95□□□□□ -1.14
TRAPPC12-219ENST00000479955 TEX43Q6ZNM6 134 aa7.94□□□□□ -1.14
TRAPPC12-219ENST00000479955 Q8N3U1 123 aa7.94□□□□□ -1.14
TRAPPC12-219ENST00000479955 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
TRAPPC12-219ENST00000479955 C2orf88Q9BSF0 95 aa7.94□□□□□ -1.14
TRAPPC12-219ENST00000479955 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
TRAPPC12-219ENST00000479955 M0R2N4 97 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 LEPROTL1O95214 131 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 PDZD11Q5EBL8 140 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 Q6ZR54 194 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 FAM19A2Q8N3H0 131 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 TM2D2Q9BX73 214 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
TRAPPC12-219ENST00000479955 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 A0A096LNJ9 63 aa7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 NUPR1O60356 82 aa7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 LINC00310P59036 64 aa7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 SS18Q15532 418 aa7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 PACRGQ96M98 296 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC12-219ENST00000479955 C1orf134Q5TEV5 83 aa7.91□□□□□ -1.14
TRAPPC12-219ENST00000479955 Q6ZUT4 128 aa7.91□□□□□ -1.14
TRAPPC12-219ENST00000479955 C6orf223Q8N319 242 aa7.91□□□□□ -1.14
TRAPPC12-219ENST00000479955 C1orf43Q9BWL3 253 aa7.91□□□□□ -1.14
TRAPPC12-219ENST00000479955 IGKV3OR2-268A0A0C4DH90 116 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 IFITM10A6NMD0 228 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 PRSS1P07477 247 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 SEC11AP67812 179 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 PMVKQ15126 192 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 IFI27L1Q96BM0 104 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 AMELXQ99217 191 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 OPRPNQ99935 248 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 KRTAP1-5Q9BYS1 174 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 Q9HAA7 133 aa7.9□□□□□ -1.14
TRAPPC12-219ENST00000479955 VPS13DQ5THJ4 4388 aa7.89□□□□□ -1.15
TRAPPC12-219ENST00000479955 IGKV2D-24A0A075B6R9 120 aa7.89□□□□□ -1.15
TRAPPC12-219ENST00000479955 FABP4P15090 132 aa7.89□□□□□ -1.15
TRAPPC12-219ENST00000479955 S100A2P29034 98 aa7.89□□□□□ -1.15
TRAPPC12-219ENST00000479955 CLPSL2Q6UWE3 100 aa7.89□□□□□ -1.15
TRAPPC12-219ENST00000479955 FAM104AQ969W3 186 aa7.89□□□□□ -1.15
TRAPPC12-219ENST00000479955 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
TRAPPC12-219ENST00000479955 PSCAO43653 123 aa7.88□□□□□ -1.15
TRAPPC12-219ENST00000479955 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
TRAPPC12-219ENST00000479955 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
TRAPPC12-219ENST00000479955 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
TRAPPC12-219ENST00000479955 CST9LQ9H4G1 147 aa7.88□□□□□ -1.15
TRAPPC12-219ENST00000479955 ALMS1Q8TCU4 4167 aa7.87□□□□□ -1.15
TRAPPC12-219ENST00000479955 CHCHD10Q8WYQ3 142 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC12-219ENST00000479955 IGLV10-54A0A075B6I4 117 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 TRAV12-1A0A0B4J245 112 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 PRSS29PA6NIE9 313 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 UBE2D1P51668 147 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 CD164L2Q6UWJ8 174 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 FAM19A3Q7Z5A8 133 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 LYSTQ99698 3801 aa7.86□□□□□ -1.15
TRAPPC12-219ENST00000479955 DNAH1Q9P2D7 4330 aa7.85□□□□□ -1.15
TRAPPC12-219ENST00000479955 C5orf52A6NGY3 159 aa7.85□□□□□ -1.15
TRAPPC12-219ENST00000479955 XCL1P47992 114 aa7.85□□□□□ -1.15
TRAPPC12-219ENST00000479955 HERVK_113P63121 156 aa7.85□□□□□ -1.15
TRAPPC12-219ENST00000479955 HIST3H2BBQ8N257 126 aa7.85□□□□□ -1.15
TRAPPC12-219ENST00000479955 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
TRAPPC12-219ENST00000479955 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
TRAPPC12-219ENST00000479955 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.15
TRAPPC12-219ENST00000479955 CFAP161Q6P656 301 aa7.84□□□□□ -1.15
TRAPPC12-219ENST00000479955 CHTOPQ9Y3Y2 248 aaKnown RBP7.84□□□□□ -1.15
TRAPPC12-219ENST00000479955 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
TRAPPC12-219ENST00000479955 AKR1D1P51857 326 aa7.83□□□□□ -1.16
TRAPPC12-219ENST00000479955 ZC2HC1BQ5TFG8 222 aa7.83□□□□□ -1.16
TRAPPC12-219ENST00000479955 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC12-219ENST00000479955 SPATA12Q7Z6I5 190 aa7.83□□□□□ -1.16
TRAPPC12-219ENST00000479955 TMA7Q9Y2S6 64 aaKnown RBP7.83□□□□□ -1.16
TRAPPC12-219ENST00000479955 A0A0J9YXV3 536 aa7.82□□□□□ -1.16
TRAPPC12-219ENST00000479955 F8VRH5 84 aa7.82□□□□□ -1.16
TRAPPC12-219ENST00000479955 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
TRAPPC12-219ENST00000479955 COX7A2LO14548 114 aa7.82□□□□□ -1.16
TRAPPC12-219ENST00000479955 EREGO14944 169 aa7.82□□□□□ -1.16
TRAPPC12-219ENST00000479955 APOMO95445 188 aa7.82□□□□□ -1.16
TRAPPC12-219ENST00000479955 MALP21145 153 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms