RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 RAB5AP20339 215 aa13.54□□□□□ -0.24
VARS-224ENST00000479051 WFDC2Q14508 124 aa13.53□□□□□ -0.24
VARS-224ENST00000479051 GNB1LQ9BYB4 327 aa13.53□□□□□ -0.24
VARS-224ENST00000479051 PRSS47A8MTI9 375 aa13.51□□□□□ -0.25
VARS-224ENST00000479051 MT-ND6P03923 174 aa13.51□□□□□ -0.25
VARS-224ENST00000479051 FUSP35637 526 aaKnown RBP eCLIP13.51□□□□□ -0.25
VARS-224ENST00000479051 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
VARS-224ENST00000479051 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
VARS-224ENST00000479051 GCSHP23434 173 aa13.5□□□□□ -0.25
VARS-224ENST00000479051 ZNF664Q8N3J9 261 aa13.5□□□□□ -0.25
VARS-224ENST00000479051 TIMM21Q9BVV7 248 aa13.5□□□□□ -0.25
VARS-224ENST00000479051 CDC42SE2Q9NRR3 84 aa13.5□□□□□ -0.25
VARS-224ENST00000479051 DYNC1H1Q14204 4646 aaKnown RBP13.5□□□□□ -0.25
VARS-224ENST00000479051 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
VARS-224ENST00000479051 KRTAP26-1Q6PEX3 210 aa13.49□□□□□ -0.25
VARS-224ENST00000479051 UBE2D4Q9Y2X8 147 aa13.49□□□□□ -0.25
VARS-224ENST00000479051 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
VARS-224ENST00000479051 Q8N8P6 123 aa13.48□□□□□ -0.25
VARS-224ENST00000479051 KIAA1644Q3SXP7 199 aa13.47□□□□□ -0.25
VARS-224ENST00000479051 NXT2Q9NPJ8 142 aaKnown RBP13.47□□□□□ -0.25
VARS-224ENST00000479051 GAGE12HA6NDE8 117 aa13.46□□□□□ -0.25
VARS-224ENST00000479051 K7EMI3 77 aa13.46□□□□□ -0.25
VARS-224ENST00000479051 CDK2AP2O75956 126 aa13.46□□□□□ -0.25
VARS-224ENST00000479051 SS18Q15532 418 aa13.46□□□□□ -0.25
VARS-224ENST00000479051 CHCHD10Q8WYQ3 142 aaPredicted RBP13.46□□□□□ -0.25
VARS-224ENST00000479051 SPANXA1Q9NS26 97 aa13.46□□□□□ -0.25
VARS-224ENST00000479051 LINC00959A0A1B0GUT2 108 aa13.45□□□□□ -0.26
VARS-224ENST00000479051 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
VARS-224ENST00000479051 FABP9Q0Z7S8 132 aa13.45□□□□□ -0.26
VARS-224ENST00000479051 ORMDL2Q53FV1 153 aa13.45□□□□□ -0.26
VARS-224ENST00000479051 MRPL18Q9H0U6 180 aaKnown RBP13.45□□□□□ -0.26
VARS-224ENST00000479051 CFAP161Q6P656 301 aa13.44□□□□□ -0.26
VARS-224ENST00000479051 SLC7A5P1Q8MH63 180 aa13.44□□□□□ -0.26
VARS-224ENST00000479051 TGIF2-C20orf24A0A0A6YYL0 155 aa13.43□□□□□ -0.26
VARS-224ENST00000479051 CCL25O15444 150 aa13.43□□□□□ -0.26
VARS-224ENST00000479051 IFI27P40305 119 aaPredicted RBP13.43□□□□□ -0.26
VARS-224ENST00000479051 G0S2P27469 103 aa13.42□□□□□ -0.26
VARS-224ENST00000479051 XCL1P47992 114 aa13.42□□□□□ -0.26
VARS-224ENST00000479051 KRTAP10-1P60331 282 aa13.42□□□□□ -0.26
VARS-224ENST00000479051 Q6ZUT4 128 aa13.42□□□□□ -0.26
VARS-224ENST00000479051 C1orf196B1AJZ1 125 aa13.41□□□□□ -0.26
VARS-224ENST00000479051 PRSS3P2Q8NHM4 247 aa13.41□□□□□ -0.26
VARS-224ENST00000479051 CYSLTR1Q9Y271 337 aa13.41□□□□□ -0.26
VARS-224ENST00000479051 PRSS1P07477 247 aa13.4□□□□□ -0.26
VARS-224ENST00000479051 MRPS36P82909 103 aaKnown RBP13.4□□□□□ -0.26
VARS-224ENST00000479051 RNASE13Q5GAN3 156 aaKnown RBP13.4□□□□□ -0.26
VARS-224ENST00000479051 ALKBH7Q9BT30 221 aaPredicted RBP13.4□□□□□ -0.26
VARS-224ENST00000479051 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
VARS-224ENST00000479051 PYGO1Q9Y3Y4 419 aa13.4□□□□□ -0.26
VARS-224ENST00000479051 TRAPPC1Q9Y5R8 145 aa13.4□□□□□ -0.26
VARS-224ENST00000479051 hDV102S1A0JD36 115 aa13.39□□□□□ -0.27
VARS-224ENST00000479051 CD164L2Q6UWJ8 174 aa13.39□□□□□ -0.27
VARS-224ENST00000479051 TRAV13-1A0A0B4J241 112 aa13.38□□□□□ -0.27
VARS-224ENST00000479051 FOXI1Q12951 378 aa13.38□□□□□ -0.27
VARS-224ENST00000479051 C2orf66Q6UXQ4 117 aa13.38□□□□□ -0.27
VARS-224ENST00000479051 SMCO4Q9NRQ5 59 aa13.38□□□□□ -0.27
VARS-224ENST00000479051 LRP1BQ9NZR2 4599 aa13.38□□□□□ -0.27
VARS-224ENST00000479051 DNAH5Q8TE73 4624 aa13.37□□□□□ -0.27
VARS-224ENST00000479051 KIAA1109Q2LD37 5005 aa13.36□□□□□ -0.27
VARS-224ENST00000479051 IFITM10A6NMD0 228 aa13.36□□□□□ -0.27
VARS-224ENST00000479051 Q6ZN92 141 aa13.35□□□□□ -0.27
VARS-224ENST00000479051 FA2HQ7L5A8 372 aa13.35□□□□□ -0.27
VARS-224ENST00000479051 OPRPNQ99935 248 aaPredicted RBP13.35□□□□□ -0.27
VARS-224ENST00000479051 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.34□□□□□ -0.27
VARS-224ENST00000479051 C15orf56Q8N910 161 aa13.34□□□□□ -0.27
VARS-224ENST00000479051 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
VARS-224ENST00000479051 IGLV4-3A0A075B6K6 122 aa13.33□□□□□ -0.28
VARS-224ENST00000479051 IGHV1-58A0A0C4DH39 117 aa13.33□□□□□ -0.28
VARS-224ENST00000479051 COX7A2LO14548 114 aa13.33□□□□□ -0.28
VARS-224ENST00000479051 NPSP0C0P6 89 aa13.33□□□□□ -0.28
VARS-224ENST00000479051 MALP21145 153 aa13.33□□□□□ -0.28
VARS-224ENST00000479051 CNBPP62633 177 aaKnown RBP13.33□□□□□ -0.28
VARS-224ENST00000479051 TEX43Q6ZNM6 134 aa13.33□□□□□ -0.28
VARS-224ENST00000479051 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
VARS-224ENST00000479051 PAPPA-AS1Q5QFB9 102 aa13.32□□□□□ -0.28
VARS-224ENST00000479051 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
VARS-224ENST00000479051 YPEL4Q96NS1 127 aa13.32□□□□□ -0.28
VARS-224ENST00000479051 C2orf88Q9BSF0 95 aa13.32□□□□□ -0.28
VARS-224ENST00000479051 GVQW2A0A096LPI5 108 aaPredicted RBP13.31□□□□□ -0.28
VARS-224ENST00000479051 LINC01620Q4KN68 170 aa13.31□□□□□ -0.28
VARS-224ENST00000479051 HIGD2BQ4VC39 106 aa13.31□□□□□ -0.28
VARS-224ENST00000479051 FAM104AQ969W3 186 aa13.31□□□□□ -0.28
VARS-224ENST00000479051 LINC01546A6NGU7 62 aa13.3□□□□□ -0.28
VARS-224ENST00000479051 C9orf163Q8N9P6 203 aa13.3□□□□□ -0.28
VARS-224ENST00000479051 TOMM6Q96B49 74 aa13.3□□□□□ -0.28
VARS-224ENST00000479051 VCX2Q9H322 139 aa13.3□□□□□ -0.28
VARS-224ENST00000479051 APOMO95445 188 aa13.29□□□□□ -0.28
VARS-224ENST00000479051 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
VARS-224ENST00000479051 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
VARS-224ENST00000479051 XGP55808 180 aa13.28□□□□□ -0.28
VARS-224ENST00000479051 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
VARS-224ENST00000479051 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
VARS-224ENST00000479051 ZNF561-AS1K7EIQ3 104 aa13.27□□□□□ -0.29
VARS-224ENST00000479051 RAB5BP61020 215 aa13.27□□□□□ -0.29
VARS-224ENST00000479051 Q6ZSA8 131 aa13.27□□□□□ -0.29
VARS-224ENST00000479051 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
VARS-224ENST00000479051 IGHV3-64A0A075B6Q5 118 aa13.26□□□□□ -0.29
VARS-224ENST00000479051 HERC2O95714 4834 aa13.26□□□□□ -0.29
VARS-224ENST00000479051 ERASQ7Z444 233 aa13.26□□□□□ -0.29
VARS-224ENST00000479051 FAM30AQ9NZY2 134 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms