RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 POLA1P09884 1462 aaPredicted RBP1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 NRXN1Q9ULB1 1477 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 UNC13BO14795 1591 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 ARHGEF5Q12774 1597 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 EXPH5Q8NEV8 1989 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 TMEM14DPA8MWL7 114 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 SPCS1Q9Y6A9 102 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 V9GYH0 126 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 V9GYV3 84 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 FANCAO15360 1455 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 DNMBPQ6XZF7 1577 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 DIP2BQ9P265 1576 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 DIP2CQ9Y2E4 1556 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 TANC1Q9C0D5 1861 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 EHBP1L1Q8N3D4 1523 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 EFNA4P52798 201 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 KLKP1Q107X0 134 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 ETDBQ3ZM63 59 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 CCL19Q99731 98 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 RABAC1Q9UI14 185 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 MYO7AQ13402 2215 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 MYOM1P52179 1685 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 HMGXB3Q12766 1538 aa1.4□□□□□ -2.18
SMARCA1-204ENST00000478420 PLXNA1Q9UIW2 1896 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 NLRP1Q9C000 1473 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 TRBV25-1A0A075B6N4 114 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 LOC285095A0A1B0GVY8 99 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 A0A1W2PPM0 123 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 CAV3P56539 151 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 Q6ZQY7 126 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 Q86TA4 180 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 PPP1R1CQ8WVI7 109 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 Q96NJ1 140 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 ST20Q9HBF5 79 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 MED13LQ71F56 2210 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 DLG5Q8TDM6 1919 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 PSME4Q14997 1843 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 DOCK2Q92608 1830 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 KIF14Q15058 1648 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 ARFGEF1Q9Y6D6 1849 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 WFDC2Q14508 124 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 NMSQ5H8A3 153 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 TMEM170BQ5T4T1 132 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 AMELXQ99217 191 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 WFDC6Q9BQY6 131 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 TMEM14BQ9NUH8 114 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 R4GMQ9 66 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 ARL2-SNX15V9GYD0 113 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 PPLO60437 1756 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 RGPD4Q7Z3J3 1758 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 E9PCH4 1651 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 CLTCQ00610 1675 aaKnown RBP1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 CEP350Q5VT06 3117 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 CCDC88BA6NC98 1476 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 MYO3AQ8NEV4 1616 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 FAM223BA6NKX1 122 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 F8VRH5 84 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 M0R135 149 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 ADIRFQ15847 76 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 PMCHL1Q16048 86 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 CACNA1BQ00975 2339 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 TRGV1A0A0A0MS02 117 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 BCE1O60756 84 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 SAA2P0DJI9 122 aaPredicted RBP1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 LINC01600Q96MT4 127 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 LINC01558Q9Y6Z2 57 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 ASCC3Q8N3C0 2202 aaKnown RBP1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 AFDNP55196 1824 aaKnown RBP1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 SIPA1L3O60292 1781 aaPredicted RBP1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 MYH4Q9Y623 1939 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 KIF20BQ96Q89 1820 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 F2Z2F3 143 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 PSMG4Q5JS54 123 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 BVES-AS1Q5T3Y7 98 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 CFAP126Q5VTH2 177 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 BAGE3Q86Y29 109 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 RGPD3A6NKT7 1758 aaPredicted RBP1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 MAP3K4Q9Y6R4 1608 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 SCN7AQ01118 1682 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ZMYM4Q5VZL5 1548 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 UBR1Q8IWV7 1749 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 LRRIQ1Q96JM4 1722 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 DNAJC13O75165 2243 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ABCA1O95477 2261 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 TRAV1-2A0A0B4J238 106 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 CTXND1A0A1B0GTU2 59 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ZNF815PA8K554 130 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 F8WEM9 126 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 IGLC2P0DOY2 106 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 IGLC3P0DOY3 106 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ZNF137PP52743 207 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 SNRPFP62306 86 aaKnown RBP1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 C10orf99Q6UWK7 81 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 BAGE2Q86Y30 109 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms