RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 IGHV3-30-3P0DP02 117 aa12.49□□□□□ -0.41
LINC00336-201ENST00000477984 HTN1P15515 57 aa12.49□□□□□ -0.41
LINC00336-201ENST00000477984 GEMIN7Q9H840 131 aaKnown RBP12.49□□□□□ -0.41
LINC00336-201ENST00000477984 TIMM21Q9BVV7 248 aa12.48□□□□□ -0.41
LINC00336-201ENST00000477984 C9JAW5 83 aa12.47□□□□□ -0.41
LINC00336-201ENST00000477984 LINC01587Q99440 93 aa12.47□□□□□ -0.41
LINC00336-201ENST00000477984 IGHV1-58A0A0C4DH39 117 aa12.47□□□□□ -0.41
LINC00336-201ENST00000477984 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
LINC00336-201ENST00000477984 STHQ8IWL8 128 aa12.47□□□□□ -0.41
LINC00336-201ENST00000477984 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
LINC00336-201ENST00000477984 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
LINC00336-201ENST00000477984 LINC01620Q4KN68 170 aa12.46□□□□□ -0.41
LINC00336-201ENST00000477984 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
LINC00336-201ENST00000477984 TLN2Q9Y4G6 2542 aa12.46□□□□□ -0.41
LINC00336-201ENST00000477984 ACANP16112 2415 aa12.46□□□□□ -0.41
LINC00336-201ENST00000477984 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.42
LINC00336-201ENST00000477984 PROK1P58294 105 aa12.46□□□□□ -0.42
LINC00336-201ENST00000477984 SMR3AQ99954 134 aa12.46□□□□□ -0.42
LINC00336-201ENST00000477984 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
LINC00336-201ENST00000477984 ADARB2-AS1A8MUL3 147 aa12.45□□□□□ -0.42
LINC00336-201ENST00000477984 TIMM17BO60830 172 aa12.45□□□□□ -0.42
LINC00336-201ENST00000477984 SPXQ9BT56 116 aa12.45□□□□□ -0.42
LINC00336-201ENST00000477984 MAST4O15021 2626 aa12.45□□□□□ -0.42
LINC00336-201ENST00000477984 TRBV10-2A0A0K0K1G8 114 aa12.44□□□□□ -0.42
LINC00336-201ENST00000477984 PRM2P04554 102 aa12.44□□□□□ -0.42
LINC00336-201ENST00000477984 CITED1Q99966 193 aa12.44□□□□□ -0.42
LINC00336-201ENST00000477984 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 LY6G6DO95868 133 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 MIAQ16674 131 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 BEAN1Q3B7T3 259 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 DNAJC30Q96LL9 226 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 TNFRSF18Q9Y5U5 241 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 SORL1Q92673 2214 aa12.43□□□□□ -0.42
LINC00336-201ENST00000477984 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
LINC00336-201ENST00000477984 CHCHD7Q9BUK0 85 aa12.42□□□□□ -0.42
LINC00336-201ENST00000477984 XCL2Q9UBD3 114 aa12.42□□□□□ -0.42
LINC00336-201ENST00000477984 CUBNO60494 3623 aa12.42□□□□□ -0.42
LINC00336-201ENST00000477984 IGLV1-51P01701 117 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 IFITM1P13164 125 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 Q1RN00 199 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 ZFAND6Q6FIF0 208 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 NDUFA12Q9UI09 145 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 UBE2D4Q9Y2X8 147 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 TRIAP1O43715 76 aa12.41□□□□□ -0.42
LINC00336-201ENST00000477984 HIVEP1P15822 2718 aa12.4□□□□□ -0.42
LINC00336-201ENST00000477984 IGHV3-73A0A0B4J1V6 119 aa12.4□□□□□ -0.42
LINC00336-201ENST00000477984 H3BT86 120 aa12.4□□□□□ -0.42
LINC00336-201ENST00000477984 Q6Q795 121 aa12.4□□□□□ -0.43
LINC00336-201ENST00000477984 IL17DQ8TAD2 202 aa12.4□□□□□ -0.43
LINC00336-201ENST00000477984 ICOSQ9Y6W8 199 aa12.4□□□□□ -0.43
LINC00336-201ENST00000477984 IGLV5-45A0A087WSX0 123 aa12.39□□□□□ -0.43
LINC00336-201ENST00000477984 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
LINC00336-201ENST00000477984 RS1O15537 224 aa12.39□□□□□ -0.43
LINC00336-201ENST00000477984 NTN5Q8WTR8 489 aaPredicted RBP12.39□□□□□ -0.43
LINC00336-201ENST00000477984 COX6CP09669 75 aa12.38□□□□□ -0.43
LINC00336-201ENST00000477984 TIRAPP58753 221 aa12.38□□□□□ -0.43
LINC00336-201ENST00000477984 TRAV8-3A0A0A6YYJ7 113 aa12.38□□□□□ -0.43
LINC00336-201ENST00000477984 H7C2G1 150 aa12.38□□□□□ -0.43
LINC00336-201ENST00000477984 ADAMTSL4-AS1Q5T5F5 129 aa12.38□□□□□ -0.43
LINC00336-201ENST00000477984 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
LINC00336-201ENST00000477984 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
LINC00336-201ENST00000477984 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
LINC00336-201ENST00000477984 Q6ZSN1 163 aa12.37□□□□□ -0.43
LINC00336-201ENST00000477984 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
LINC00336-201ENST00000477984 KRTAP10-3P60369 221 aa12.36□□□□□ -0.43
LINC00336-201ENST00000477984 DEFB121Q5J5C9 76 aa12.36□□□□□ -0.43
LINC00336-201ENST00000477984 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
LINC00336-201ENST00000477984 NDUFA1O15239 70 aa12.35□□□□□ -0.43
LINC00336-201ENST00000477984 PRSS2P07478 247 aa12.35□□□□□ -0.43
LINC00336-201ENST00000477984 FAM19A3Q7Z5A8 133 aa12.35□□□□□ -0.43
LINC00336-201ENST00000477984 IGHV3OR16-12A0A075B7B8 117 aa12.34□□□□□ -0.43
LINC00336-201ENST00000477984 LST1O00453 97 aa12.34□□□□□ -0.43
LINC00336-201ENST00000477984 CEMP1Q6PRD7 247 aaPredicted RBP12.34□□□□□ -0.43
LINC00336-201ENST00000477984 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
LINC00336-201ENST00000477984 FAM240AA0A1B0GVK7 77 aa12.34□□□□□ -0.43
LINC00336-201ENST00000477984 H7C423 109 aa12.34□□□□□ -0.43
LINC00336-201ENST00000477984 GIG44P09565 113 aaPredicted RBP12.34□□□□□ -0.43
LINC00336-201ENST00000477984 SNCGO76070 127 aa12.33□□□□□ -0.44
LINC00336-201ENST00000477984 C2orf82Q6UX34 121 aa12.33□□□□□ -0.44
LINC00336-201ENST00000477984 ANAPC13Q9BS18 74 aa12.33□□□□□ -0.44
LINC00336-201ENST00000477984 PPDPFQ9H3Y8 114 aa12.32□□□□□ -0.44
LINC00336-201ENST00000477984 F8P00451 2351 aa12.32□□□□□ -0.44
LINC00336-201ENST00000477984 GAGE2BQ13066 116 aa12.32□□□□□ -0.44
LINC00336-201ENST00000477984 GAGE2EQ4V326 116 aa12.32□□□□□ -0.44
LINC00336-201ENST00000477984 GAGE2DQ9UEU5 116 aa12.32□□□□□ -0.44
LINC00336-201ENST00000477984 IGLV5-39A0A0G2JS06 123 aa12.31□□□□□ -0.44
LINC00336-201ENST00000477984 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
LINC00336-201ENST00000477984 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
LINC00336-201ENST00000477984 Q9UF83 564 aa12.31□□□□□ -0.44
LINC00336-201ENST00000477984 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
LINC00336-201ENST00000477984 TEP1Q99973 2627 aaKnown RBP12.3□□□□□ -0.44
LINC00336-201ENST00000477984 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
LINC00336-201ENST00000477984 INAFM1C9JVW0 142 aa12.3□□□□□ -0.44
LINC00336-201ENST00000477984 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
LINC00336-201ENST00000477984 NF1P21359 2839 aa12.3□□□□□ -0.44
LINC00336-201ENST00000477984 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.29□□□□□ -0.44
LINC00336-201ENST00000477984 IGKV2-29A2NJV5 120 aaPredicted RBP12.29□□□□□ -0.44
LINC00336-201ENST00000477984 PF4P02776 101 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms