RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 LINC00467Q9BRT7 94 aa9.96□□□□□ -0.81
HDAC1-206ENST00000476391 MED13LQ71F56 2210 aa9.96□□□□□ -0.81
HDAC1-206ENST00000476391 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
HDAC1-206ENST00000476391 NCR3O14931 201 aa9.96□□□□□ -0.82
HDAC1-206ENST00000476391 COX6A2Q02221 97 aa9.96□□□□□ -0.82
HDAC1-206ENST00000476391 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.82
HDAC1-206ENST00000476391 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.82
HDAC1-206ENST00000476391 FAM19A3Q7Z5A8 133 aa9.96□□□□□ -0.82
HDAC1-206ENST00000476391 TRAV7A0A075B6U4 112 aa9.95□□□□□ -0.82
HDAC1-206ENST00000476391 IGFL3Q6UXB1 125 aa9.95□□□□□ -0.82
HDAC1-206ENST00000476391 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
HDAC1-206ENST00000476391 C19orf54Q5BKX5 351 aa9.95□□□□□ -0.82
HDAC1-206ENST00000476391 DEFB109BQ30KR1 87 aa9.94□□□□□ -0.82
HDAC1-206ENST00000476391 LINC00242Q5T6M2 205 aa9.94□□□□□ -0.82
HDAC1-206ENST00000476391 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
HDAC1-206ENST00000476391 ARRDC1-AS1Q9H2J1 176 aa9.94□□□□□ -0.82
HDAC1-206ENST00000476391 NCOR1O75376 2440 aa9.94□□□□□ -0.82
HDAC1-206ENST00000476391 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 C5orf56Q8N8D9 126 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 CACNA1BQ00975 2339 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 IGHV3OR16-12A0A075B7B8 117 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 LECT2O14960 151 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 AVPP01185 164 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 ENHOQ6UWT2 76 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 FAM19A1Q7Z5A9 133 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 WFDC11Q8NEX6 87 aa9.93□□□□□ -0.82
HDAC1-206ENST00000476391 JMJD7-PLA2G4BH0Y9G9 81 aa9.92□□□□□ -0.82
HDAC1-206ENST00000476391 MIR7-3HGQ8N6C7 128 aa9.92□□□□□ -0.82
HDAC1-206ENST00000476391 PROK1P58294 105 aa9.92□□□□□ -0.82
HDAC1-206ENST00000476391 SND1-IT1Q9HBX3 110 aa9.92□□□□□ -0.82
HDAC1-206ENST00000476391 ORMDL1Q9P0S3 153 aa9.92□□□□□ -0.82
HDAC1-206ENST00000476391 SPTBN2O15020 2390 aa9.91□□□□□ -0.82
HDAC1-206ENST00000476391 IGHV3-73A0A0B4J1V6 119 aa9.91□□□□□ -0.82
HDAC1-206ENST00000476391 SS18Q15532 418 aa9.91□□□□□ -0.82
HDAC1-206ENST00000476391 WFDC9Q8NEX5 89 aa9.91□□□□□ -0.82
HDAC1-206ENST00000476391 ZDBF2Q9HCK1 2354 aa9.91□□□□□ -0.82
HDAC1-206ENST00000476391 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
HDAC1-206ENST00000476391 USMG5Q96IX5 58 aa9.91□□□□□ -0.82
HDAC1-206ENST00000476391 SIRPDQ9H106 197 aa9.9□□□□□ -0.82
HDAC1-206ENST00000476391 PCNX1Q96RV3 2341 aa9.9□□□□□ -0.82
HDAC1-206ENST00000476391 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.83
HDAC1-206ENST00000476391 UBL5Q9BZL1 73 aa9.9□□□□□ -0.83
HDAC1-206ENST00000476391 NDUFC1O43677 76 aa9.88□□□□□ -0.83
HDAC1-206ENST00000476391 SPINK13Q1W4C9 94 aa9.88□□□□□ -0.83
HDAC1-206ENST00000476391 BRK1Q8WUW1 75 aa9.88□□□□□ -0.83
HDAC1-206ENST00000476391 H3BUA1 57 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 K7EMT4 169 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 RPL36AP83881 106 aaKnown RBP9.87□□□□□ -0.83
HDAC1-206ENST00000476391 RPL36ALQ969Q0 106 aaKnown RBP9.87□□□□□ -0.83
HDAC1-206ENST00000476391 Q9UF83 564 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 PTPRQQ9UMZ3 2332 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 LY6HO94772 140 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 IGKV3-20P01619 116 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 SAA4P35542 130 aa9.87□□□□□ -0.83
HDAC1-206ENST00000476391 ADGRG4Q8IZF6 3080 aa9.86□□□□□ -0.83
HDAC1-206ENST00000476391 MOB4Q9Y3A3 225 aa9.86□□□□□ -0.83
HDAC1-206ENST00000476391 TRBV7-6A0A0J9YX20 115 aa9.86□□□□□ -0.83
HDAC1-206ENST00000476391 SNRPD3P62318 126 aaKnown RBP9.86□□□□□ -0.83
HDAC1-206ENST00000476391 BLCAPP62952 87 aa9.86□□□□□ -0.83
HDAC1-206ENST00000476391 Q6ZSN1 163 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 IGHV3-38A0A0C4DH36 116 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 F8WEM9 126 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 IGHV3-11P01762 117 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 SLPIP03973 132 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 EDN2P20800 178 aa9.85□□□□□ -0.83
HDAC1-206ENST00000476391 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
HDAC1-206ENST00000476391 ZFP36P26651 326 aaKnown RBP9.84□□□□□ -0.83
HDAC1-206ENST00000476391 RBM3P98179 157 aaKnown RBP9.84□□□□□ -0.83
HDAC1-206ENST00000476391 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
HDAC1-206ENST00000476391 BOD1L1Q8NFC6 3051 aa9.83□□□□□ -0.84
HDAC1-206ENST00000476391 CFHR3Q02985 330 aa9.83□□□□□ -0.84
HDAC1-206ENST00000476391 RMI2Q96E14 147 aa9.83□□□□□ -0.84
HDAC1-206ENST00000476391 LINC00474Q9P2X8 69 aa9.83□□□□□ -0.84
HDAC1-206ENST00000476391 A0A0U1RQV1 116 aa9.82□□□□□ -0.84
HDAC1-206ENST00000476391 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
HDAC1-206ENST00000476391 DOPEY2Q9Y3R5 2298 aa9.82□□□□□ -0.84
HDAC1-206ENST00000476391 CACNA1HO95180 2353 aa9.82□□□□□ -0.84
HDAC1-206ENST00000476391 CCL18P55774 89 aa9.82□□□□□ -0.84
HDAC1-206ENST00000476391 SNURFQ9Y675 71 aa9.82□□□□□ -0.84
HDAC1-206ENST00000476391 CDSNQ15517 529 aa9.81□□□□□ -0.84
HDAC1-206ENST00000476391 LY6G6DO95868 133 aa9.81□□□□□ -0.84
HDAC1-206ENST00000476391 PLA2G2CQ5R387 149 aa9.81□□□□□ -0.84
HDAC1-206ENST00000476391 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
HDAC1-206ENST00000476391 K7EQG2 157 aa9.8□□□□□ -0.84
HDAC1-206ENST00000476391 Q96MF0 132 aa9.8□□□□□ -0.84
HDAC1-206ENST00000476391 PIEZO2Q9H5I5 2752 aa9.79□□□□□ -0.84
HDAC1-206ENST00000476391 APC2O95996 2303 aa9.79□□□□□ -0.84
HDAC1-206ENST00000476391 LINC00158P58513 81 aa9.79□□□□□ -0.84
HDAC1-206ENST00000476391 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
HDAC1-206ENST00000476391 GPR179Q6PRD1 2367 aa9.79□□□□□ -0.84
HDAC1-206ENST00000476391 HTN1P15515 57 aa9.78□□□□□ -0.84
HDAC1-206ENST00000476391 CDC42SE2Q9NRR3 84 aa9.78□□□□□ -0.84
HDAC1-206ENST00000476391 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.84
HDAC1-206ENST00000476391 IBA57-AS1B1ANH7 110 aa9.77□□□□□ -0.84
HDAC1-206ENST00000476391 NBL1P41271 181 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms