RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 FXYD7P58549 80 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 INTS1Q8N201 2190 aaKnown RBP4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 TDRD6O60522 2096 aaKnown RBP4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 TANC2Q9HCD6 1990 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 IQCF6A8MYZ5 107 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV3-11P01762 117 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 SNRPGP62308 76 aaKnown RBP4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 FHL1Q13642 323 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 DEFB133Q30KQ1 61 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 C2orf83Q53S99 150 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 Q6ZRP5 223 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 FAM19A2Q8N3H0 131 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 PFN4Q8NHR9 129 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 DSCAML1Q8TD84 2053 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 TRBV7-1A0A0A6YYK4 115 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 KRTAP4-16G5E9R7 235 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 C11orf1Q9H5F2 150 aa4.25□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV3-43A0A0B4J1X8 118 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 TRBV10-2A0A0K0K1G8 114 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 C11orf94C9JXX5 98 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 HMGN2P05204 90 aaKnown RBP4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 CCL3P10147 92 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 TFF3Q07654 80 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 DAZAP2Q15038 168 aaPredicted RBP4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 COL7A1Q02388 2944 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 TMSB15BA0A087X1C1 80 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 SRRM5B3KS81 715 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV3-13P01766 116 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 SUMO4Q6EEV6 95 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 NDUFA11Q86Y39 141 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 CAMK2N2Q96S95 79 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 ZNF580Q9UK33 172 aa4.24□□□□□ -1.73
SMARCE1-208ENST00000474246 NINQ8N4C6 2090 aa4.23□□□□□ -1.73
SMARCE1-208ENST00000474246 C10orf142B7Z368 130 aa4.23□□□□□ -1.73
SMARCE1-208ENST00000474246 KRTAP27-1Q3LI81 207 aa4.23□□□□□ -1.73
SMARCE1-208ENST00000474246 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
SMARCE1-208ENST00000474246 UNC13CQ8NB66 2214 aa4.23□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV4OR15-8A0A075B7B6 117 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 A6NIN4 97 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 C16orf90A8MZG2 172 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 C16orf97H3BN30 126 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 NOVP48745 357 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 SMIM14Q96QK8 99 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 IL25Q9H293 177 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 KIAA2026Q5HYC2 2103 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 PIKFYVEQ9Y2I7 2098 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 TRBV7-3A0A075B6L6 115 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 TRAV1-2A0A0B4J238 106 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 CEBPZOSA8MTT3 80 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 LYPD2Q6UXB3 125 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 PRO1854Q9UHT4 67 aa4.22□□□□□ -1.73
SMARCE1-208ENST00000474246 STAB2Q8WWQ8 2551 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 IGHV3-35A0A0C4DH35 117 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 CGB3P0DN86 165 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 CGB7P0DN87 165 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 IFI27P40305 119 aaPredicted RBP4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 ATXN8Q156A1 80 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 Q6JHZ5 121 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 BPESC1Q9GZL8 116 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 C8orf17Q9NRJ1 99 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 ABCA1O95477 2261 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 ARID1AO14497 2285 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 LINC01548A6NM66 108 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 HMGA1P17096 107 aaKnown RBP4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 C9orf66Q5T8R8 295 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 ZNF563Q8TA94 476 aa4.21□□□□□ -1.74
SMARCE1-208ENST00000474246 ROS1P08922 2347 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 A0A087WW49 117 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 TMEM30CPA0ZSE6 113 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 FAM223BA6NKX1 122 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 CMC4P56277 68 aaPredicted RBP4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 SUPT4H1P63272 117 aaKnown RBP4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 PLGLAQ15195 96 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 CNEP1R1Q8N9A8 125 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 NPBQ8NG41 125 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 FAM167A-AS1Q96KT0 104 aa4.2□□□□□ -1.74
SMARCE1-208ENST00000474246 TRBV25-1A0A075B6N4 114 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 hDV103S1A0JD37 113 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGLV2-23P01705 113 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 IGHV1-69P01742 117 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 PRB4P10163 310 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 MIFP14174 115 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 GTF3C1Q12789 2109 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 C9orf116Q5BN46 136 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 CRIP3Q6Q6R5 217 aa4.19□□□□□ -1.74
SMARCE1-208ENST00000474246 Q8N6K4 173 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms