RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
LMNA-212ENST00000470835 C15orf56Q8N910 161 aa11□□□□□ -0.65
LMNA-212ENST00000470835 GATD1Q8NB37 220 aa11□□□□□ -0.65
LMNA-212ENST00000470835 NUP35Q8NFH5 326 aa11□□□□□ -0.65
LMNA-212ENST00000470835 RNF185Q96GF1 192 aa11□□□□□ -0.65
LMNA-212ENST00000470835 FOXA3P55318 350 aaPredicted RBP10.99□□□□□ -0.65
LMNA-212ENST00000470835 Q6ZRU5 148 aa10.98□□□□□ -0.65
LMNA-212ENST00000470835 A0A1B0GUT8 65 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 MT1HL1P0DM35 61 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 S100PP25815 95 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 HIGD2BQ4VC39 106 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 AMMECR1LQ6DCA0 310 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 CFAP161Q6P656 301 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
LMNA-212ENST00000470835 TMEM242Q9NWH2 141 aa10.97□□□□□ -0.65
LMNA-212ENST00000470835 RIGQ13278 110 aa10.96□□□□□ -0.65
LMNA-212ENST00000470835 MRPL54Q6P161 138 aaKnown RBP10.96□□□□□ -0.65
LMNA-212ENST00000470835 IMMP2LQ96T52 175 aa10.96□□□□□ -0.65
LMNA-212ENST00000470835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.95□□□□□ -0.66
LMNA-212ENST00000470835 IGKV2-29A2NJV5 120 aaPredicted RBP10.95□□□□□ -0.66
LMNA-212ENST00000470835 NCR2O95944 276 aa10.95□□□□□ -0.66
LMNA-212ENST00000470835 APCSP02743 223 aa10.95□□□□□ -0.66
LMNA-212ENST00000470835 S100A1P23297 94 aa10.95□□□□□ -0.66
LMNA-212ENST00000470835 COX6A2Q02221 97 aa10.95□□□□□ -0.66
LMNA-212ENST00000470835 RNASEKQ6P5S7 137 aaKnown RBP10.95□□□□□ -0.66
LMNA-212ENST00000470835 SMIM15Q7Z3B0 74 aa10.95□□□□□ -0.66
LMNA-212ENST00000470835 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
LMNA-212ENST00000470835 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
LMNA-212ENST00000470835 RPS10P46783 165 aaKnown RBP10.94□□□□□ -0.66
LMNA-212ENST00000470835 SDHAF1A6NFY7 115 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 H7C423 109 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 PHOX2AO14813 284 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 FGF6P10767 208 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 CAMPP49913 170 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 C7orf33Q8WU49 177 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 BTF3L4Q96K17 158 aa10.93□□□□□ -0.66
LMNA-212ENST00000470835 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
LMNA-212ENST00000470835 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
LMNA-212ENST00000470835 IGKV2-24A0A0C4DH68 120 aa10.92□□□□□ -0.66
LMNA-212ENST00000470835 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
LMNA-212ENST00000470835 CBLN2Q8IUK8 224 aa10.92□□□□□ -0.66
LMNA-212ENST00000470835 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
LMNA-212ENST00000470835 A0A1B0GW15 77 aa10.91□□□□□ -0.66
LMNA-212ENST00000470835 HBBP68871 147 aa10.91□□□□□ -0.66
LMNA-212ENST00000470835 ATP5L2Q7Z4Y8 100 aa10.91□□□□□ -0.66
LMNA-212ENST00000470835 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
LMNA-212ENST00000470835 A0A1B0GXF2 115 aa10.9□□□□□ -0.66
LMNA-212ENST00000470835 S100A8P05109 93 aa10.9□□□□□ -0.66
LMNA-212ENST00000470835 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
LMNA-212ENST00000470835 FOXI1Q12951 378 aa10.9□□□□□ -0.66
LMNA-212ENST00000470835 I3L3M4 83 aa10.89□□□□□ -0.67
LMNA-212ENST00000470835 SCO1O75880 301 aa10.89□□□□□ -0.67
LMNA-212ENST00000470835 PMCHP20382 165 aa10.89□□□□□ -0.67
LMNA-212ENST00000470835 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
LMNA-212ENST00000470835 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
LMNA-212ENST00000470835 TRBV6-5A0A0K0K1A5 114 aa10.88□□□□□ -0.67
LMNA-212ENST00000470835 XCL1P47992 114 aa10.88□□□□□ -0.67
LMNA-212ENST00000470835 STPG4Q8N801 248 aa10.88□□□□□ -0.67
LMNA-212ENST00000470835 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
LMNA-212ENST00000470835 TMEM191AQ9H0A3 160 aa10.88□□□□□ -0.67
LMNA-212ENST00000470835 A0A096LNI7 61 aa10.87□□□□□ -0.67
LMNA-212ENST00000470835 CCL25O15444 150 aa10.87□□□□□ -0.67
LMNA-212ENST00000470835 PRR3P79522 188 aaKnown RBP10.87□□□□□ -0.67
LMNA-212ENST00000470835 AMN1Q8IY45 258 aa10.87□□□□□ -0.67
LMNA-212ENST00000470835 GAS8-AS1O95177 125 aa10.86□□□□□ -0.67
LMNA-212ENST00000470835 TSHBP01222 138 aa10.86□□□□□ -0.67
LMNA-212ENST00000470835 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
LMNA-212ENST00000470835 ESDP10768 282 aa10.85□□□□□ -0.67
LMNA-212ENST00000470835 MRAP2Q96G30 205 aa10.85□□□□□ -0.67
LMNA-212ENST00000470835 YPEL4Q96NS1 127 aa10.85□□□□□ -0.67
LMNA-212ENST00000470835 ST20Q9HBF5 79 aa10.85□□□□□ -0.67
LMNA-212ENST00000470835 TRBV24-1A0A075B6N3 115 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 LINC00526Q96FQ7 95 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 CARD19Q96LW7 228 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
LMNA-212ENST00000470835 TNXBP22105 4242 aa10.83□□□□□ -0.68
LMNA-212ENST00000470835 RAB4AP20338 218 aa10.83□□□□□ -0.68
LMNA-212ENST00000470835 COX19Q49B96 90 aa10.83□□□□□ -0.68
LMNA-212ENST00000470835 LINC00474Q9P2X8 69 aa10.83□□□□□ -0.68
LMNA-212ENST00000470835 SS18Q15532 418 aa10.82□□□□□ -0.68
LMNA-212ENST00000470835 MRPL51Q4U2R6 128 aaKnown RBP10.82□□□□□ -0.68
LMNA-212ENST00000470835 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
LMNA-212ENST00000470835 SMKR1H3BMG3 65 aa10.81□□□□□ -0.68
LMNA-212ENST00000470835 GNB1LQ9BYB4 327 aa10.81□□□□□ -0.68
LMNA-212ENST00000470835 CDC42SE2Q9NRR3 84 aa10.81□□□□□ -0.68
LMNA-212ENST00000470835 TRBV27A0A0K0K1C4 114 aa10.8□□□□□ -0.68
LMNA-212ENST00000470835 MT-ND6P03923 174 aa10.8□□□□□ -0.68
LMNA-212ENST00000470835 POLR2KP53803 58 aaKnown RBP10.8□□□□□ -0.68
LMNA-212ENST00000470835 CD164L2Q6UWJ8 174 aa10.8□□□□□ -0.68
LMNA-212ENST00000470835 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
LMNA-212ENST00000470835 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
LMNA-212ENST00000470835 CKS2P33552 79 aa10.79□□□□□ -0.68
LMNA-212ENST00000470835 SYCNQ0VAF6 134 aa10.79□□□□□ -0.68
LMNA-212ENST00000470835 ZNF664Q8N3J9 261 aa10.79□□□□□ -0.68
LMNA-212ENST00000470835 MRPL18Q9H0U6 180 aaKnown RBP10.79□□□□□ -0.68
LMNA-212ENST00000470835 D6R8Y8 96 aa10.78□□□□□ -0.68
LMNA-212ENST00000470835 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms