RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.54
LINC00960-201ENST00000463183 FLG2Q5D862 2391 aaPredicted RBP11.65□□□□□ -0.54
LINC00960-201ENST00000463183 FAM104BQ5XKR9 115 aa11.64□□□□□ -0.55
LINC00960-201ENST00000463183 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
LINC00960-201ENST00000463183 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
LINC00960-201ENST00000463183 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
LINC00960-201ENST00000463183 RPS10P5Q9NQ39 176 aa11.64□□□□□ -0.55
LINC00960-201ENST00000463183 AP5S1Q9NUS5 200 aa11.64□□□□□ -0.55
LINC00960-201ENST00000463183 TRBV27A0A0K0K1C4 114 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 VCYO14598 125 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 ESDP10768 282 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 CKS2P33552 79 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
LINC00960-201ENST00000463183 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 NRACQ8N912 160 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
LINC00960-201ENST00000463183 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
LINC00960-201ENST00000463183 HBBP68871 147 aa11.62□□□□□ -0.55
LINC00960-201ENST00000463183 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
LINC00960-201ENST00000463183 A0A1B0GW15 77 aa11.61□□□□□ -0.55
LINC00960-201ENST00000463183 PPP1R17O96001 155 aa11.61□□□□□ -0.55
LINC00960-201ENST00000463183 XCL1P47992 114 aa11.61□□□□□ -0.55
LINC00960-201ENST00000463183 C9orf163Q8N9P6 203 aa11.61□□□□□ -0.55
LINC00960-201ENST00000463183 MYCBP2O75592 4640 aa11.61□□□□□ -0.55
LINC00960-201ENST00000463183 S100A8P05109 93 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 A0A1B0GXF2 115 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 D6R8Y8 96 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
LINC00960-201ENST00000463183 CFAP161Q6P656 301 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
LINC00960-201ENST00000463183 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
LINC00960-201ENST00000463183 CCL25O15444 150 aa11.59□□□□□ -0.55
LINC00960-201ENST00000463183 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
LINC00960-201ENST00000463183 LINC00959A0A1B0GUT2 108 aa11.58□□□□□ -0.56
LINC00960-201ENST00000463183 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
LINC00960-201ENST00000463183 SLPIP03973 132 aa11.58□□□□□ -0.56
LINC00960-201ENST00000463183 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
LINC00960-201ENST00000463183 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.58□□□□□ -0.56
LINC00960-201ENST00000463183 ATP6V1G1O75348 118 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 S100A1P23297 94 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 S100PP25815 95 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
LINC00960-201ENST00000463183 FOXI1Q12951 378 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 SS18Q15532 418 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
LINC00960-201ENST00000463183 ZNF664Q8N3J9 261 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
LINC00960-201ENST00000463183 DMBT1Q9UGM3 2413 aaPredicted RBP11.56□□□□□ -0.56
LINC00960-201ENST00000463183 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
LINC00960-201ENST00000463183 PANO1I0J062 215 aa11.56□□□□□ -0.56
LINC00960-201ENST00000463183 NPYP01303 97 aa11.56□□□□□ -0.56
LINC00960-201ENST00000463183 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
LINC00960-201ENST00000463183 YPEL4Q96NS1 127 aa11.56□□□□□ -0.56
LINC00960-201ENST00000463183 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
LINC00960-201ENST00000463183 HERC1Q15751 4861 aa11.55□□□□□ -0.56
LINC00960-201ENST00000463183 UBE2D4Q9Y2X8 147 aa11.55□□□□□ -0.56
LINC00960-201ENST00000463183 TCAPO15273 167 aa11.54□□□□□ -0.56
LINC00960-201ENST00000463183 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
LINC00960-201ENST00000463183 LINC00526Q96FQ7 95 aa11.54□□□□□ -0.56
LINC00960-201ENST00000463183 SMIM2Q9BVW6 85 aa11.54□□□□□ -0.56
LINC00960-201ENST00000463183 SMCO4Q9NRQ5 59 aa11.54□□□□□ -0.56
LINC00960-201ENST00000463183 TRBV24-1A0A075B6N3 115 aa11.53□□□□□ -0.56
LINC00960-201ENST00000463183 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
LINC00960-201ENST00000463183 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
LINC00960-201ENST00000463183 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
LINC00960-201ENST00000463183 Q6ZUT4 128 aa11.53□□□□□ -0.56
LINC00960-201ENST00000463183 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
LINC00960-201ENST00000463183 TMEM136Q6ZRR5 245 aa11.52□□□□□ -0.57
LINC00960-201ENST00000463183 ORMDL3Q8N138 153 aa11.52□□□□□ -0.57
LINC00960-201ENST00000463183 PRELID3AQ96N28 172 aa11.52□□□□□ -0.57
LINC00960-201ENST00000463183 CBLN2Q8IUK8 224 aa11.51□□□□□ -0.57
LINC00960-201ENST00000463183 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
LINC00960-201ENST00000463183 TGIF2-C20orf24A0A0A6YYL0 155 aa11.5□□□□□ -0.57
LINC00960-201ENST00000463183 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
LINC00960-201ENST00000463183 LOC389332A0A1B0GUA5 103 aa11.5□□□□□ -0.57
LINC00960-201ENST00000463183 PPBPP02775 128 aa11.5□□□□□ -0.57
LINC00960-201ENST00000463183 COX6A2Q02221 97 aa11.5□□□□□ -0.57
LINC00960-201ENST00000463183 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
LINC00960-201ENST00000463183 IGKV2-24A0A0C4DH68 120 aa11.49□□□□□ -0.57
LINC00960-201ENST00000463183 MALP21145 153 aa11.49□□□□□ -0.57
LINC00960-201ENST00000463183 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
LINC00960-201ENST00000463183 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
LINC00960-201ENST00000463183 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
LINC00960-201ENST00000463183 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
LINC00960-201ENST00000463183 RAB5AP20339 215 aa11.48□□□□□ -0.57
LINC00960-201ENST00000463183 COX19Q49B96 90 aa11.48□□□□□ -0.57
LINC00960-201ENST00000463183 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
LINC00960-201ENST00000463183 CSDC2Q9Y534 153 aaKnown RBP11.48□□□□□ -0.57
LINC00960-201ENST00000463183 ZNF561-AS1K7EIQ3 104 aa11.47□□□□□ -0.57
LINC00960-201ENST00000463183 PHOX2AO14813 284 aa11.47□□□□□ -0.57
LINC00960-201ENST00000463183 PRSS3P2Q8NHM4 247 aa11.47□□□□□ -0.57
LINC00960-201ENST00000463183 A0A087WYN8 130 aa11.46□□□□□ -0.57
LINC00960-201ENST00000463183 J3QL48 77 aa11.46□□□□□ -0.57
LINC00960-201ENST00000463183 COX7A2LO14548 114 aa11.46□□□□□ -0.57
LINC00960-201ENST00000463183 SCO1O75880 301 aa11.46□□□□□ -0.57
LINC00960-201ENST00000463183 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
LINC00960-201ENST00000463183 TIMM21Q9BVV7 248 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms