RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 URB1-AS1Q96HZ7 61 aa5.41□□□□□ -1.54
SND1-202ENST00000461056 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
SND1-202ENST00000461056 SMCO4Q9NRQ5 59 aa5.41□□□□□ -1.54
SND1-202ENST00000461056 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
SND1-202ENST00000461056 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
SND1-202ENST00000461056 A0A087WTM6 91 aa5.4□□□□□ -1.54
SND1-202ENST00000461056 TRAV8-3A0A0A6YYJ7 113 aa5.4□□□□□ -1.54
SND1-202ENST00000461056 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
SND1-202ENST00000461056 TCAPO15273 167 aa5.4□□□□□ -1.54
SND1-202ENST00000461056 ZNF25P17030 456 aaPredicted RBP5.4□□□□□ -1.54
SND1-202ENST00000461056 LINC00269Q8N2A0 174 aa5.4□□□□□ -1.54
SND1-202ENST00000461056 TMEM262E9PQX1 116 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 RPL39P62891 51 aaKnown RBP5.39□□□□□ -1.55
SND1-202ENST00000461056 MIAQ16674 131 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 UBE2WQ96B02 151 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 KIR2DL4Q99706 377 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 MAP1LC3AQ9H492 121 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 Q9HAA7 133 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
SND1-202ENST00000461056 FAT1Q14517 4588 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 A0A096LNJ9 63 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 K7EMI3 77 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 EREGO14944 169 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 SCO1O75880 301 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 ANGP03950 147 aaKnown RBP5.38□□□□□ -1.55
SND1-202ENST00000461056 FCER1GP30273 86 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 IFI27P40305 119 aaPredicted RBP5.38□□□□□ -1.55
SND1-202ENST00000461056 MRPS36P82909 103 aaKnown RBP5.38□□□□□ -1.55
SND1-202ENST00000461056 REG3AQ06141 175 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 Q0VG73 95 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 FABP9Q0Z7S8 132 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
SND1-202ENST00000461056 NXT2Q9NPJ8 142 aaKnown RBP5.38□□□□□ -1.55
SND1-202ENST00000461056 LOC389332A0A1B0GUA5 103 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 IGIPA6NJ69 53 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 LINC00310P59036 64 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 CLPSL2Q6UWE3 100 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 Q6ZUT4 128 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 SPANXA1Q9NS26 97 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 PYGO1Q9Y3Y4 419 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 TRAPPC1Q9Y5R8 145 aa5.37□□□□□ -1.55
SND1-202ENST00000461056 IGLV4-3A0A075B6K6 122 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 UBE2L6O14933 153 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 RAB5AP20339 215 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 FOXI1Q12951 378 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 LINC00173Q6ZV60 143 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 ZNF664Q8N3J9 261 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 NTN5Q8WTR8 489 aaPredicted RBP5.36□□□□□ -1.55
SND1-202ENST00000461056 OPRPNQ99935 248 aaPredicted RBP5.36□□□□□ -1.55
SND1-202ENST00000461056 TM2D2Q9BX73 214 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 COX11Q9Y6N1 276 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
SND1-202ENST00000461056 IGKV2D-24A0A075B6R9 120 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 ATP6V1G1O75348 118 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 NPSP0C0P6 89 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 ORMDL2Q53FV1 153 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 AMMECR1LQ6DCA0 310 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 RNASEKQ6P5S7 137 aaKnown RBP5.35□□□□□ -1.55
SND1-202ENST00000461056 C2orf66Q6UXQ4 117 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 Q8N814 137 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 TOMM6Q96B49 74 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 RMI2Q96E14 147 aa5.35□□□□□ -1.55
SND1-202ENST00000461056 IGLV10-54A0A075B6I4 117 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 CRPP02741 224 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 TRGC2P03986 189 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 FUSP35637 526 aaKnown RBP eCLIP5.34□□□□□ -1.55
SND1-202ENST00000461056 RNASE13Q5GAN3 156 aaKnown RBP5.34□□□□□ -1.55
SND1-202ENST00000461056 SPATA12Q7Z6I5 190 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 C15orf56Q8N910 161 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 BAALCQ8WXS3 180 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 CHCHD10Q8WYQ3 142 aaPredicted RBP5.34□□□□□ -1.55
SND1-202ENST00000461056 AMELXQ99217 191 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 C1orf43Q9BWL3 253 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 VPS13BQ7Z7G8 4022 aa5.34□□□□□ -1.55
SND1-202ENST00000461056 LECT2O14960 151 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 PDZD11Q5EBL8 140 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 TMEM18Q96B42 140 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 TIMM17AQ99595 171 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 CYSLTR1Q9Y271 337 aa5.33□□□□□ -1.56
SND1-202ENST00000461056 GAGE12HA6NDE8 117 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 CCL25O15444 150 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 SLPIP03973 132 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 PRSS1P07477 247 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 CDPF1Q6NVV7 123 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 PRSS3P2Q8NHM4 247 aa5.32□□□□□ -1.56
SND1-202ENST00000461056 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
SND1-202ENST00000461056 GVQW2A0A096LPI5 108 aaPredicted RBP5.31□□□□□ -1.56
SND1-202ENST00000461056 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
SND1-202ENST00000461056 PSCAO43653 123 aa5.31□□□□□ -1.56
SND1-202ENST00000461056 LINC00614P0C842 121 aa5.31□□□□□ -1.56
SND1-202ENST00000461056 S100A1P23297 94 aa5.31□□□□□ -1.56
SND1-202ENST00000461056 UBE2D1P51668 147 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms