RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 SPAG11AQ6PDA7 123 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SFTA2Q6UW10 78 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SCIMPQ6UWF3 145 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 TTC9CQ8N5M4 171 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 PPP1R1CQ8WVI7 109 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 TMEM191AQ9H0A3 160 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SPANXA1Q9NS26 97 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SPANXCQ9NY87 97 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 PKD1L2Q7Z442 2459 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 NALCNQ8IZF0 1738 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 GRIN2AQ12879 1464 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 NHSL1Q5SYE7 1610 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 ERCC6L2Q5T890 1561 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 ABCA3Q99758 1704 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 FMN2Q9NZ56 1722 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 MARF1Q9Y4F3 1742 aaKnown RBP-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 TENM4Q6N022 2769 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 OOSP1A8MZH6 123 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 M0R3E3 92 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SIX6O95475 246 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 ZNF818PQ6ZRF7 136 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 LCN9Q8WX39 176 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 ARL11Q969Q4 196 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 TCEAL4Q96EI5 215 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 LINC00472Q9H8W2 130 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 NDUFA4L2Q9NRX3 87 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SERP1Q9Y6X1 66 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 V9GYH0 126 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 CFTRP13569 1480 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 IFT140Q96RY7 1462 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 RIMS1Q86UR5 1692 aaKnown RBP-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 DAPK1P53355 1430 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 PAPPAQ13219 1627 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 ALMS1Q8TCU4 4167 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 PIEZO2Q9H5I5 2752 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 ROCK2O75116 1388 aaKnown RBP-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 DCHS2Q6V1P9 2916 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 APC2O95996 2303 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 LRRC37A2A6NM11 1700 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 CHD1O14646 1710 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 NUP188Q5SRE5 1749 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 IGLC7A0M8Q6 106 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 C10orf142B7Z368 130 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 I3L2K1 104 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 SNAPC5O75971 98 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 SMIM6P0DI80 62 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 DEFB109BQ30KR1 87 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 TMEM170BQ5T4T1 132 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 Q6AWC8 147 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 AQP10Q96PS8 301 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 TSC22D3Q99576 134 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 CYP4F30PQ9H0H9 118 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 RERGLQ9H628 205 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 R4GMQ9 66 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 TOP2BQ02880 1626 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 NSD1Q96L73 2696 aaPredicted RBP-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 ZNF609O15014 1411 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 CPSF1Q10570 1443 aaKnown RBP-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 PPIP5K1Q6PFW1 1433 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 C10orf71Q711Q0 1435 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 PAPPA2Q9BXP8 1791 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 KMT2AQ03164 3969 aa-0.05□□□□□ -2.42
PTPN22-203ENST00000460620 HECTD4Q9Y4D8 3996 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 CREBBPQ92793 2442 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 TRBV7-3A0A075B6L6 115 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 A0A0D9SFI3 127 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 F8VRH5 84 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 CHKB-CPT1BH3BT56 60 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 K7EP13 123 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 HMGN4O00479 90 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SPINK8P0C7L1 97 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 AKAIN1P0CW23 69 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SPRR1AP35321 89 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SELENOWP63302 87 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 WFDC2Q14508 124 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 KLK9Q2XQG4 91 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 C9orf153Q5TBE3 101 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 Q5VV11 94 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 Q6JHZ5 121 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 MRPL54Q6P161 138 aaKnown RBP-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 BAGE2Q86Y30 109 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 Q8IZM0 81 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 AMELXQ99217 191 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SPANXDQ9BXN6 97 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 FXYD6Q9H0Q3 95 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 DYNLRB1Q9NP97 96 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 CRIPTQ9P021 101 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 CCDC167Q9P0B6 97 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SCP2D1Q9UJQ7 156 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 LENEPQ9Y5L5 61 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 ZANQ9Y493 2812 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 KNDC1Q76NI1 1749 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 TEP1Q99973 2627 aaKnown RBP-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 COL12A1Q99715 3063 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 ARHGEF12Q9NZN5 1544 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 MYOM1P52179 1685 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms