RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
ABCD4-202ENST00000460308 LAMTOR2Q9Y2Q5 125 aa14.1□□□□□ -0.15
ABCD4-202ENST00000460308 LRP1BQ9NZR2 4599 aa14.09□□□□□ -0.15
ABCD4-202ENST00000460308 DNAH5Q8TE73 4624 aa14.09□□□□□ -0.15
ABCD4-202ENST00000460308 USP17L23D6RBM5 183 aa14.08□□□□□ -0.16
ABCD4-202ENST00000460308 APOC3P02656 99 aa14.08□□□□□ -0.16
ABCD4-202ENST00000460308 RAB5AP20339 215 aa14.08□□□□□ -0.16
ABCD4-202ENST00000460308 KRTAP10-1P60331 282 aa14.08□□□□□ -0.16
ABCD4-202ENST00000460308 KRTAP26-1Q6PEX3 210 aa14.08□□□□□ -0.16
ABCD4-202ENST00000460308 ZNF664Q8N3J9 261 aa14.07□□□□□ -0.16
ABCD4-202ENST00000460308 MAP1LC3AQ9H492 121 aa14.07□□□□□ -0.16
ABCD4-202ENST00000460308 LOC389332A0A1B0GUA5 103 aa14.06□□□□□ -0.16
ABCD4-202ENST00000460308 CDC42SE2Q9NRR3 84 aa14.06□□□□□ -0.16
ABCD4-202ENST00000460308 GAGE12HA6NDE8 117 aa14.05□□□□□ -0.16
ABCD4-202ENST00000460308 SVBPQ8N300 66 aa14.04□□□□□ -0.16
ABCD4-202ENST00000460308 CHCHD10Q8WYQ3 142 aaPredicted RBP14.04□□□□□ -0.16
ABCD4-202ENST00000460308 UBE2D4Q9Y2X8 147 aa14.04□□□□□ -0.16
ABCD4-202ENST00000460308 CSDC2Q9Y534 153 aaKnown RBP14.04□□□□□ -0.16
ABCD4-202ENST00000460308 PRSS47A8MTI9 375 aa14.03□□□□□ -0.16
ABCD4-202ENST00000460308 SNAPINO95295 136 aa14.03□□□□□ -0.16
ABCD4-202ENST00000460308 SS18Q15532 418 aa14.03□□□□□ -0.16
ABCD4-202ENST00000460308 COX19Q49B96 90 aa14.03□□□□□ -0.16
ABCD4-202ENST00000460308 LINC00959A0A1B0GUT2 108 aa14.02□□□□□ -0.17
ABCD4-202ENST00000460308 TIMM21Q9BVV7 248 aa14.02□□□□□ -0.17
ABCD4-202ENST00000460308 PRSS1P07477 247 aa14.01□□□□□ -0.17
ABCD4-202ENST00000460308 RPL39P62891 51 aaKnown RBP14.01□□□□□ -0.17
ABCD4-202ENST00000460308 KIAA1644Q3SXP7 199 aa14.01□□□□□ -0.17
ABCD4-202ENST00000460308 Q8N8P6 123 aa14.01□□□□□ -0.17
ABCD4-202ENST00000460308 GNB1LQ9BYB4 327 aa14.01□□□□□ -0.17
ABCD4-202ENST00000460308 XCL1P47992 114 aa14□□□□□ -0.17
ABCD4-202ENST00000460308 CFAP161Q6P656 301 aa14□□□□□ -0.17
ABCD4-202ENST00000460308 hDV102S1A0JD36 115 aa13.98□□□□□ -0.17
ABCD4-202ENST00000460308 CCL25O15444 150 aa13.98□□□□□ -0.17
ABCD4-202ENST00000460308 RNASE13Q5GAN3 156 aaKnown RBP13.98□□□□□ -0.17
ABCD4-202ENST00000460308 SPANXA1Q9NS26 97 aa13.98□□□□□ -0.17
ABCD4-202ENST00000460308 AP5S1Q9NUS5 200 aa13.98□□□□□ -0.17
ABCD4-202ENST00000460308 HERC2O95714 4834 aa13.98□□□□□ -0.17
ABCD4-202ENST00000460308 MT-ND6P03923 174 aa13.97□□□□□ -0.17
ABCD4-202ENST00000460308 LINC01620Q4KN68 170 aa13.97□□□□□ -0.17
ABCD4-202ENST00000460308 NXT2Q9NPJ8 142 aaKnown RBP13.97□□□□□ -0.17
ABCD4-202ENST00000460308 RYR1P21817 5038 aa13.97□□□□□ -0.17
ABCD4-202ENST00000460308 C1orf196B1AJZ1 125 aa13.96□□□□□ -0.17
ABCD4-202ENST00000460308 ORMDL2Q53FV1 153 aa13.96□□□□□ -0.17
ABCD4-202ENST00000460308 Q6ZUT4 128 aa13.96□□□□□ -0.17
ABCD4-202ENST00000460308 TRAV13-1A0A0B4J241 112 aa13.95□□□□□ -0.18
ABCD4-202ENST00000460308 K7EMI3 77 aa13.95□□□□□ -0.18
ABCD4-202ENST00000460308 IFI27P40305 119 aaPredicted RBP13.95□□□□□ -0.18
ABCD4-202ENST00000460308 FABP9Q0Z7S8 132 aa13.95□□□□□ -0.18
ABCD4-202ENST00000460308 FOXI1Q12951 378 aa13.95□□□□□ -0.18
ABCD4-202ENST00000460308 XGP55808 180 aa13.94□□□□□ -0.18
ABCD4-202ENST00000460308 CD164L2Q6UWJ8 174 aa13.94□□□□□ -0.18
ABCD4-202ENST00000460308 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
ABCD4-202ENST00000460308 APOBP04114 4563 aaKnown RBP13.93□□□□□ -0.18
ABCD4-202ENST00000460308 TGIF2-C20orf24A0A0A6YYL0 155 aa13.93□□□□□ -0.18
ABCD4-202ENST00000460308 MRPS36P82909 103 aaKnown RBP13.93□□□□□ -0.18
ABCD4-202ENST00000460308 PRSS3P2Q8NHM4 247 aa13.93□□□□□ -0.18
ABCD4-202ENST00000460308 HSPG2P98160 4391 aa13.92□□□□□ -0.18
ABCD4-202ENST00000460308 OPRPNQ99935 248 aaPredicted RBP13.92□□□□□ -0.18
ABCD4-202ENST00000460308 FAM30AQ9NZY2 134 aa13.92□□□□□ -0.18
ABCD4-202ENST00000460308 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
ABCD4-202ENST00000460308 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.91□□□□□ -0.18
ABCD4-202ENST00000460308 G0S2P27469 103 aa13.91□□□□□ -0.18
ABCD4-202ENST00000460308 C15orf56Q8N910 161 aa13.91□□□□□ -0.18
ABCD4-202ENST00000460308 ALKBH7Q9BT30 221 aaPredicted RBP13.91□□□□□ -0.18
ABCD4-202ENST00000460308 PYGO1Q9Y3Y4 419 aa13.91□□□□□ -0.18
ABCD4-202ENST00000460308 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
ABCD4-202ENST00000460308 HIGD2BQ4VC39 106 aa13.9□□□□□ -0.18
ABCD4-202ENST00000460308 C2orf66Q6UXQ4 117 aa13.9□□□□□ -0.18
ABCD4-202ENST00000460308 SLC7A5P1Q8MH63 180 aa13.9□□□□□ -0.18
ABCD4-202ENST00000460308 C9orf163Q8N9P6 203 aa13.9□□□□□ -0.18
ABCD4-202ENST00000460308 IGHV1-58A0A0C4DH39 117 aa13.89□□□□□ -0.19
ABCD4-202ENST00000460308 IFITM10A6NMD0 228 aa13.89□□□□□ -0.19
ABCD4-202ENST00000460308 CNBPP62633 177 aaKnown RBP13.89□□□□□ -0.19
ABCD4-202ENST00000460308 Q8N1X5 172 aa13.89□□□□□ -0.19
ABCD4-202ENST00000460308 MALP21145 153 aa13.88□□□□□ -0.19
ABCD4-202ENST00000460308 HAMPP81172 84 aa13.88□□□□□ -0.19
ABCD4-202ENST00000460308 COX7A2LO14548 114 aa13.87□□□□□ -0.19
ABCD4-202ENST00000460308 FAM104AQ969W3 186 aa13.87□□□□□ -0.19
ABCD4-202ENST00000460308 TMEM141Q96I45 108 aa13.87□□□□□ -0.19
ABCD4-202ENST00000460308 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
ABCD4-202ENST00000460308 GVQW2A0A096LPI5 108 aaPredicted RBP13.86□□□□□ -0.19
ABCD4-202ENST00000460308 Q6ZN92 141 aa13.86□□□□□ -0.19
ABCD4-202ENST00000460308 Q6ZSA8 131 aa13.86□□□□□ -0.19
ABCD4-202ENST00000460308 TEX43Q6ZNM6 134 aa13.85□□□□□ -0.19
ABCD4-202ENST00000460308 ZNF561-AS1K7EIQ3 104 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 SMR3BP02814 79 aaPredicted RBP13.84□□□□□ -0.19
ABCD4-202ENST00000460308 SLPIP03973 132 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 FA2HQ7L5A8 372 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 C5orf38Q86SI9 138 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 C2orf88Q9BSF0 95 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 VCX2Q9H322 139 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 SMCO4Q9NRQ5 59 aa13.84□□□□□ -0.19
ABCD4-202ENST00000460308 IGHV3-64A0A075B6Q5 118 aa13.83□□□□□ -0.2
ABCD4-202ENST00000460308 DNAH8Q96JB1 4490 aa13.82□□□□□ -0.2
ABCD4-202ENST00000460308 EPM2AB3EWF7 344 aa13.82□□□□□ -0.2
ABCD4-202ENST00000460308 APOMO95445 188 aa13.82□□□□□ -0.2
ABCD4-202ENST00000460308 NPSP0C0P6 89 aa13.82□□□□□ -0.2
ABCD4-202ENST00000460308 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
ABCD4-202ENST00000460308 KRTAP17-1Q9BYP8 105 aa13.82□□□□□ -0.2
ABCD4-202ENST00000460308 IGIPA6NJ69 53 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms