RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 K7EMI3 77 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 PSCAO43653 123 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 RAB5AP20339 215 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
SMPD4-215ENST00000457039 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
SMPD4-215ENST00000457039 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 TMEM101Q96IK0 257 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 CDC42SE2Q9NRR3 84 aa9.37□□□□□ -0.91
SMPD4-215ENST00000457039 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
SMPD4-215ENST00000457039 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
SMPD4-215ENST00000457039 FAM104AQ969W3 186 aa9.36□□□□□ -0.91
SMPD4-215ENST00000457039 LINC01546A6NGU7 62 aa9.35□□□□□ -0.91
SMPD4-215ENST00000457039 SMAGPQ0VAQ4 97 aa9.35□□□□□ -0.91
SMPD4-215ENST00000457039 WFDC2Q14508 124 aa9.35□□□□□ -0.91
SMPD4-215ENST00000457039 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
SMPD4-215ENST00000457039 ZNF664Q8N3J9 261 aa9.35□□□□□ -0.91
SMPD4-215ENST00000457039 COLCA2A8K830 154 aa9.34□□□□□ -0.91
SMPD4-215ENST00000457039 SPANXA1Q9NS26 97 aa9.34□□□□□ -0.91
SMPD4-215ENST00000457039 IGLV10-54A0A075B6I4 117 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 Q6ZUT4 128 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 PRSS3P2Q8NHM4 247 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 PYGO1Q9Y3Y4 419 aa9.33□□□□□ -0.92
SMPD4-215ENST00000457039 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
SMPD4-215ENST00000457039 SCO1O75880 301 aa9.32□□□□□ -0.92
SMPD4-215ENST00000457039 MRPS36P82909 103 aaKnown RBP9.32□□□□□ -0.92
SMPD4-215ENST00000457039 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
SMPD4-215ENST00000457039 SPATA12Q7Z6I5 190 aa9.32□□□□□ -0.92
SMPD4-215ENST00000457039 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
SMPD4-215ENST00000457039 EREGO14944 169 aa9.31□□□□□ -0.92
SMPD4-215ENST00000457039 Q8N814 137 aa9.31□□□□□ -0.92
SMPD4-215ENST00000457039 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
SMPD4-215ENST00000457039 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
SMPD4-215ENST00000457039 OPRPNQ99935 248 aaPredicted RBP9.31□□□□□ -0.92
SMPD4-215ENST00000457039 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
SMPD4-215ENST00000457039 LECT2O14960 151 aa9.3□□□□□ -0.92
SMPD4-215ENST00000457039 RNASE13Q5GAN3 156 aaKnown RBP9.3□□□□□ -0.92
SMPD4-215ENST00000457039 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
SMPD4-215ENST00000457039 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
SMPD4-215ENST00000457039 TRGC2P03986 189 aa9.29□□□□□ -0.92
SMPD4-215ENST00000457039 FA2HQ7L5A8 372 aa9.29□□□□□ -0.92
SMPD4-215ENST00000457039 GAGE12HA6NDE8 117 aa9.28□□□□□ -0.92
SMPD4-215ENST00000457039 NPSP0C0P6 89 aa9.28□□□□□ -0.92
SMPD4-215ENST00000457039 G0S2P27469 103 aa9.28□□□□□ -0.92
SMPD4-215ENST00000457039 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
SMPD4-215ENST00000457039 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
SMPD4-215ENST00000457039 DNAH8Q96JB1 4490 aa9.28□□□□□ -0.92
SMPD4-215ENST00000457039 USP17L23D6RBM5 183 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 CCL25O15444 150 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 ATP6V1G1O75348 118 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 LINC00614P0C842 121 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 FUSP35637 526 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMPD4-215ENST00000457039 FOXI1Q12951 378 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 SS18Q15532 418 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
SMPD4-215ENST00000457039 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
SMPD4-215ENST00000457039 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 A0A096LNJ9 63 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 TRAV13-1A0A0B4J241 112 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 C1orf196B1AJZ1 125 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 S100A1P23297 94 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 XCL1P47992 114 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
SMPD4-215ENST00000457039 TMEM141Q96I45 108 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
SMPD4-215ENST00000457039 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
SMPD4-215ENST00000457039 C14orf177Q52M58 125 aa9.25□□□□□ -0.93
SMPD4-215ENST00000457039 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
SMPD4-215ENST00000457039 AMELXQ99217 191 aa9.25□□□□□ -0.93
SMPD4-215ENST00000457039 RYR1P21817 5038 aa9.25□□□□□ -0.93
SMPD4-215ENST00000457039 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
SMPD4-215ENST00000457039 IFITM10A6NMD0 228 aa9.24□□□□□ -0.93
SMPD4-215ENST00000457039 RAB5BP61020 215 aa9.24□□□□□ -0.93
SMPD4-215ENST00000457039 ERASQ7Z444 233 aa9.24□□□□□ -0.93
SMPD4-215ENST00000457039 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
SMPD4-215ENST00000457039 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-215ENST00000457039 PRSS1P07477 247 aa9.23□□□□□ -0.93
SMPD4-215ENST00000457039 ZC2HC1BQ5TFG8 222 aa9.23□□□□□ -0.93
SMPD4-215ENST00000457039 TEX43Q6ZNM6 134 aa9.23□□□□□ -0.93
SMPD4-215ENST00000457039 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
SMPD4-215ENST00000457039 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
SMPD4-215ENST00000457039 UBE2D1P51668 147 aa9.22□□□□□ -0.93
SMPD4-215ENST00000457039 Q6ZN92 141 aa9.22□□□□□ -0.93
SMPD4-215ENST00000457039 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
SMPD4-215ENST00000457039 VCX2Q9H322 139 aa9.22□□□□□ -0.93
SMPD4-215ENST00000457039 HBDP02042 147 aa9.21□□□□□ -0.94
SMPD4-215ENST00000457039 PAPPA-AS1Q5QFB9 102 aa9.21□□□□□ -0.94
SMPD4-215ENST00000457039 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
SMPD4-215ENST00000457039 IGHV3OR16-9A0A0B4J2B5 98 aa9.2□□□□□ -0.94
SMPD4-215ENST00000457039 LINC00310P59036 64 aa9.2□□□□□ -0.94
SMPD4-215ENST00000457039 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
SMPD4-215ENST00000457039 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
SMPD4-215ENST00000457039 CFAP161Q6P656 301 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms