RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 FAM236BA0A1B0GV22 79 aa12.22□□□□□ -0.45
TCOF1-206ENST00000445265 EDN2P20800 178 aa12.22□□□□□ -0.45
TCOF1-206ENST00000445265 Q6ZSV7 163 aa12.22□□□□□ -0.45
TCOF1-206ENST00000445265 SS18L2Q9UHA2 77 aa12.22□□□□□ -0.45
TCOF1-206ENST00000445265 PRO0255Q9UI72 69 aa12.22□□□□□ -0.45
TCOF1-206ENST00000445265 A0A0C4DFX4 3053 aa12.22□□□□□ -0.45
TCOF1-206ENST00000445265 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.45
TCOF1-206ENST00000445265 INSL3P51460 131 aa12.21□□□□□ -0.45
TCOF1-206ENST00000445265 LINC00643Q86TS7 51 aa12.21□□□□□ -0.45
TCOF1-206ENST00000445265 RANBP2P49792 3224 aaKnown RBP12.21□□□□□ -0.45
TCOF1-206ENST00000445265 SPART-AS1P0CW21 52 aa12.21□□□□□ -0.46
TCOF1-206ENST00000445265 TLN2Q9Y4G6 2542 aa12.21□□□□□ -0.46
TCOF1-206ENST00000445265 A8MZ25 164 aa12.2□□□□□ -0.46
TCOF1-206ENST00000445265 TRACP01848 142 aa12.19□□□□□ -0.46
TCOF1-206ENST00000445265 TRBV6-4A0A1B0GX49 114 aa12.19□□□□□ -0.46
TCOF1-206ENST00000445265 JMJD7-PLA2G4BH0Y9G9 81 aa12.19□□□□□ -0.46
TCOF1-206ENST00000445265 UBE2D3P61077 147 aa12.19□□□□□ -0.46
TCOF1-206ENST00000445265 UBE2D2P62837 147 aa12.19□□□□□ -0.46
TCOF1-206ENST00000445265 NKAPP1Q8N9T2 125 aa12.18□□□□□ -0.46
TCOF1-206ENST00000445265 RNF183Q96D59 192 aa12.18□□□□□ -0.46
TCOF1-206ENST00000445265 TMEM126AQ9H061 195 aa12.18□□□□□ -0.46
TCOF1-206ENST00000445265 ATOX1O00244 68 aa12.18□□□□□ -0.46
TCOF1-206ENST00000445265 NDUFV3P56181 108 aaKnown RBP12.18□□□□□ -0.46
TCOF1-206ENST00000445265 TSPEAR-AS2P59090 65 aa12.18□□□□□ -0.46
TCOF1-206ENST00000445265 AGRNO00468 2067 aa12.18□□□□□ -0.46
TCOF1-206ENST00000445265 MYO18BQ8IUG5 2567 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 Q9HAA7 133 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 SPTBN4Q9H254 2564 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 CHD8Q9HCK8 2581 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 LST1O00453 97 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 KIF25-AS1Q9Y6Z4 181 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 C18orf65Q6ZTR6 163 aa12.17□□□□□ -0.46
TCOF1-206ENST00000445265 IBA57-AS1B1ANH7 110 aa12.16□□□□□ -0.46
TCOF1-206ENST00000445265 PRM2P04554 102 aa12.16□□□□□ -0.46
TCOF1-206ENST00000445265 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
TCOF1-206ENST00000445265 TRBV6-8A0A0A6YYG3 113 aa12.15□□□□□ -0.46
TCOF1-206ENST00000445265 BRCA2P51587 3418 aa12.15□□□□□ -0.46
TCOF1-206ENST00000445265 C3orf56Q8N813 242 aa12.14□□□□□ -0.47
TCOF1-206ENST00000445265 IGKV3D-7A0A0C4DH55 119 aa12.14□□□□□ -0.47
TCOF1-206ENST00000445265 ESM1Q9NQ30 184 aa12.14□□□□□ -0.47
TCOF1-206ENST00000445265 F8WEM9 126 aa12.14□□□□□ -0.47
TCOF1-206ENST00000445265 XGP55808 180 aa12.14□□□□□ -0.47
TCOF1-206ENST00000445265 DEFB135Q30KP9 77 aa12.14□□□□□ -0.47
TCOF1-206ENST00000445265 SPAG11BQ08648 103 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 WFDC11Q8NEX6 87 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 AMELXQ99217 191 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 H3BQ85 93 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 ABCA2Q9BZC7 2435 aa12.13□□□□□ -0.47
TCOF1-206ENST00000445265 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
TCOF1-206ENST00000445265 TMEM256-PLSCR3K7ERE1 68 aa12.12□□□□□ -0.47
TCOF1-206ENST00000445265 CAMK2N2Q96S95 79 aa12.12□□□□□ -0.47
TCOF1-206ENST00000445265 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
TCOF1-206ENST00000445265 FAM19A4Q96LR4 140 aa12.11□□□□□ -0.47
TCOF1-206ENST00000445265 A0A1B0GX51 115 aa12.11□□□□□ -0.47
TCOF1-206ENST00000445265 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
TCOF1-206ENST00000445265 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
TCOF1-206ENST00000445265 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
TCOF1-206ENST00000445265 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
TCOF1-206ENST00000445265 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 LINC00315P59091 139 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 ODF3L2Q3SX64 289 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 PRRC2AP48634 2157 aaKnown RBP12.09□□□□□ -0.47
TCOF1-206ENST00000445265 LYRM9A8MSI8 78 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 NCR3O14931 201 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 DEFB4AO15263 64 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 SMIM20Q8N5G0 67 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 CDC42SE2Q9NRR3 84 aa12.09□□□□□ -0.47
TCOF1-206ENST00000445265 SETD2Q9BYW2 2564 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-206ENST00000445265 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.48
TCOF1-206ENST00000445265 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
TCOF1-206ENST00000445265 RMI2Q96E14 147 aa12.08□□□□□ -0.48
TCOF1-206ENST00000445265 DEFB121Q5J5C9 76 aa12.07□□□□□ -0.48
TCOF1-206ENST00000445265 LINC00269Q8N2A0 174 aa12.07□□□□□ -0.48
TCOF1-206ENST00000445265 COL27A1Q8IZC6 1860 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-206ENST00000445265 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
TCOF1-206ENST00000445265 UBE2DNLQ8IWF7 75 aa12.06□□□□□ -0.48
TCOF1-206ENST00000445265 PSCAO43653 123 aa12.06□□□□□ -0.48
TCOF1-206ENST00000445265 RBM3P98179 157 aaKnown RBP12.06□□□□□ -0.48
TCOF1-206ENST00000445265 REG3AQ06141 175 aa12.06□□□□□ -0.48
TCOF1-206ENST00000445265 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
TCOF1-206ENST00000445265 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
TCOF1-206ENST00000445265 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-206ENST00000445265 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
TCOF1-206ENST00000445265 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
TCOF1-206ENST00000445265 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
TCOF1-206ENST00000445265 SMIM1B2RUZ4 78 aa12.04□□□□□ -0.48
TCOF1-206ENST00000445265 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
TCOF1-206ENST00000445265 ZNF843Q8N446 348 aa12.03□□□□□ -0.48
TCOF1-206ENST00000445265 FAM240AA0A1B0GVK7 77 aa12.03□□□□□ -0.48
TCOF1-206ENST00000445265 ADAMTSL4-AS1Q5T5F5 129 aa12.03□□□□□ -0.48
TCOF1-206ENST00000445265 PDE6GP18545 87 aa12.03□□□□□ -0.48
TCOF1-206ENST00000445265 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
TCOF1-206ENST00000445265 hADV29S1A0JD25 119 aa12.02□□□□□ -0.49
TCOF1-206ENST00000445265 WFDC10AQ9H1F0 79 aa12.02□□□□□ -0.49
TCOF1-206ENST00000445265 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
TCOF1-206ENST00000445265 M0QXV9 152 aa12.01□□□□□ -0.49
TCOF1-206ENST00000445265 Q6Q795 121 aa12.01□□□□□ -0.49
TCOF1-206ENST00000445265 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms