RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
LRRC42-204ENST00000444987 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
LRRC42-204ENST00000444987 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
LRRC42-204ENST00000444987 SMIM2Q9BVW6 85 aa12.32□□□□□ -0.44
LRRC42-204ENST00000444987 CDC42SE2Q9NRR3 84 aa12.32□□□□□ -0.44
LRRC42-204ENST00000444987 LAMTOR2Q9Y2Q5 125 aa12.32□□□□□ -0.44
LRRC42-204ENST00000444987 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
LRRC42-204ENST00000444987 EPM2AB3EWF7 344 aa12.31□□□□□ -0.44
LRRC42-204ENST00000444987 TIMM21Q9BVV7 248 aa12.31□□□□□ -0.44
LRRC42-204ENST00000444987 KRTAP4-5Q9BYR2 181 aa12.31□□□□□ -0.44
LRRC42-204ENST00000444987 FAM30AQ9NZY2 134 aa12.31□□□□□ -0.44
LRRC42-204ENST00000444987 PCLOQ9Y6V0 5065 aa12.31□□□□□ -0.44
LRRC42-204ENST00000444987 GAGE12HA6NDE8 117 aa12.3□□□□□ -0.44
LRRC42-204ENST00000444987 CCL25O15444 150 aa12.3□□□□□ -0.44
LRRC42-204ENST00000444987 TMEM136Q6ZRR5 245 aa12.3□□□□□ -0.44
LRRC42-204ENST00000444987 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
LRRC42-204ENST00000444987 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
LRRC42-204ENST00000444987 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 LINC00959A0A1B0GUT2 108 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 PRSS47A8MTI9 375 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 NPYP01303 97 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
LRRC42-204ENST00000444987 COMMD7Q86VX2 200 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 C9orf163Q8N9P6 203 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 PRELID3AQ96N28 172 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
LRRC42-204ENST00000444987 SS18Q15532 418 aa12.28□□□□□ -0.44
LRRC42-204ENST00000444987 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
LRRC42-204ENST00000444987 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
LRRC42-204ENST00000444987 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.26□□□□□ -0.45
LRRC42-204ENST00000444987 FAM229AH3BQW9 127 aa12.26□□□□□ -0.45
LRRC42-204ENST00000444987 LINC01620Q4KN68 170 aa12.26□□□□□ -0.45
LRRC42-204ENST00000444987 RAB5AP20339 215 aa12.25□□□□□ -0.45
LRRC42-204ENST00000444987 FOXI1Q12951 378 aa12.25□□□□□ -0.45
LRRC42-204ENST00000444987 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
LRRC42-204ENST00000444987 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
LRRC42-204ENST00000444987 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
LRRC42-204ENST00000444987 C15orf56Q8N910 161 aa12.24□□□□□ -0.45
LRRC42-204ENST00000444987 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
LRRC42-204ENST00000444987 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
LRRC42-204ENST00000444987 S100PP25815 95 aa12.23□□□□□ -0.45
LRRC42-204ENST00000444987 Q5VSD8 79 aa12.23□□□□□ -0.45
LRRC42-204ENST00000444987 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
LRRC42-204ENST00000444987 CARHSP1Q9Y2V2 147 aaKnown RBP12.23□□□□□ -0.45
LRRC42-204ENST00000444987 GVQW2A0A096LPI5 108 aaPredicted RBP12.22□□□□□ -0.45
LRRC42-204ENST00000444987 K7EMI3 77 aa12.22□□□□□ -0.45
LRRC42-204ENST00000444987 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
LRRC42-204ENST00000444987 XCL1P47992 114 aa12.22□□□□□ -0.45
LRRC42-204ENST00000444987 HAMPP81172 84 aa12.22□□□□□ -0.45
LRRC42-204ENST00000444987 IGHV1-58A0A0C4DH39 117 aa12.21□□□□□ -0.45
LRRC42-204ENST00000444987 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
LRRC42-204ENST00000444987 RHEBQ15382 184 aa12.21□□□□□ -0.45
LRRC42-204ENST00000444987 SDIM1Q6ZPB5 146 aa12.21□□□□□ -0.45
LRRC42-204ENST00000444987 SCXQ7RTU7 201 aa12.21□□□□□ -0.45
LRRC42-204ENST00000444987 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
LRRC42-204ENST00000444987 COX19Q49B96 90 aa12.2□□□□□ -0.46
LRRC42-204ENST00000444987 Q8N8P6 123 aa12.2□□□□□ -0.46
LRRC42-204ENST00000444987 RPL39P62891 51 aaKnown RBP12.19□□□□□ -0.46
LRRC42-204ENST00000444987 Q6ZUT4 128 aa12.19□□□□□ -0.46
LRRC42-204ENST00000444987 PYGO1Q9Y3Y4 419 aa12.19□□□□□ -0.46
LRRC42-204ENST00000444987 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
LRRC42-204ENST00000444987 SLPIP03973 132 aa12.18□□□□□ -0.46
LRRC42-204ENST00000444987 CIRBP-AS1Q8TBR5 109 aa12.18□□□□□ -0.46
LRRC42-204ENST00000444987 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
LRRC42-204ENST00000444987 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
LRRC42-204ENST00000444987 ORMDL2Q53FV1 153 aa12.17□□□□□ -0.46
LRRC42-204ENST00000444987 GNB1LQ9BYB4 327 aa12.17□□□□□ -0.46
LRRC42-204ENST00000444987 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
LRRC42-204ENST00000444987 LOC389332A0A1B0GUA5 103 aa12.16□□□□□ -0.46
LRRC42-204ENST00000444987 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
LRRC42-204ENST00000444987 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
LRRC42-204ENST00000444987 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
LRRC42-204ENST00000444987 PKIGQ9Y2B9 76 aa12.16□□□□□ -0.46
LRRC42-204ENST00000444987 COX7A2LO14548 114 aa12.15□□□□□ -0.46
LRRC42-204ENST00000444987 NPSP0C0P6 89 aa12.15□□□□□ -0.46
LRRC42-204ENST00000444987 G0S2P27469 103 aa12.15□□□□□ -0.46
LRRC42-204ENST00000444987 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
LRRC42-204ENST00000444987 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
LRRC42-204ENST00000444987 FAM104AQ969W3 186 aa12.15□□□□□ -0.46
LRRC42-204ENST00000444987 MT-ND6P03923 174 aa12.14□□□□□ -0.47
LRRC42-204ENST00000444987 INAFM2P0DMQ5 153 aa12.14□□□□□ -0.47
LRRC42-204ENST00000444987 MALP21145 153 aa12.14□□□□□ -0.47
LRRC42-204ENST00000444987 RPS10P5Q9NQ39 176 aa12.14□□□□□ -0.47
LRRC42-204ENST00000444987 CYSLTR1Q9Y271 337 aa12.14□□□□□ -0.47
LRRC42-204ENST00000444987 ZNF561-AS1K7EIQ3 104 aa12.13□□□□□ -0.47
LRRC42-204ENST00000444987 APOMO95445 188 aa12.13□□□□□ -0.47
LRRC42-204ENST00000444987 NDUFA5Q16718 116 aa12.13□□□□□ -0.47
LRRC42-204ENST00000444987 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
LRRC42-204ENST00000444987 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
LRRC42-204ENST00000444987 TMEM141Q96I45 108 aa12.11□□□□□ -0.47
LRRC42-204ENST00000444987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.11□□□□□ -0.47
LRRC42-204ENST00000444987 DNAH8Q96JB1 4490 aa12.1□□□□□ -0.47
LRRC42-204ENST00000444987 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
LRRC42-204ENST00000444987 SNAPINO95295 136 aa12.1□□□□□ -0.47
LRRC42-204ENST00000444987 SVBPQ8N300 66 aa12.1□□□□□ -0.47
LRRC42-204ENST00000444987 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
LRRC42-204ENST00000444987 IGHV3OR16-9A0A0B4J2B5 98 aa12.09□□□□□ -0.47
LRRC42-204ENST00000444987 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
LRRC42-204ENST00000444987 KIAA1644Q3SXP7 199 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms