RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
CSNK1E-210ENST00000442216 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.82
CSNK1E-210ENST00000442216 PKHD1P08F94 4074 aa9.9□□□□□ -0.82
CSNK1E-210ENST00000442216 DNAH11Q96DT5 4516 aa9.89□□□□□ -0.83
CSNK1E-210ENST00000442216 IGLV10-54A0A075B6I4 117 aa9.89□□□□□ -0.83
CSNK1E-210ENST00000442216 LECT2O14960 151 aa9.89□□□□□ -0.83
CSNK1E-210ENST00000442216 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
CSNK1E-210ENST00000442216 UBE2D4Q9Y2X8 147 aa9.89□□□□□ -0.83
CSNK1E-210ENST00000442216 K7EMI3 77 aa9.88□□□□□ -0.83
CSNK1E-210ENST00000442216 MT-ND6P03923 174 aa9.88□□□□□ -0.83
CSNK1E-210ENST00000442216 RAB5AP20339 215 aa9.88□□□□□ -0.83
CSNK1E-210ENST00000442216 GCSHP23434 173 aa9.88□□□□□ -0.83
CSNK1E-210ENST00000442216 ZNF664Q8N3J9 261 aa9.88□□□□□ -0.83
CSNK1E-210ENST00000442216 Q8N8P6 123 aa9.87□□□□□ -0.83
CSNK1E-210ENST00000442216 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
CSNK1E-210ENST00000442216 CCL25O15444 150 aa9.86□□□□□ -0.83
CSNK1E-210ENST00000442216 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
CSNK1E-210ENST00000442216 NXT2Q9NPJ8 142 aaKnown RBP9.86□□□□□ -0.83
CSNK1E-210ENST00000442216 SPANXA1Q9NS26 97 aa9.86□□□□□ -0.83
CSNK1E-210ENST00000442216 IGKV3OR2-268A0A0C4DH90 116 aa9.85□□□□□ -0.83
CSNK1E-210ENST00000442216 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
CSNK1E-210ENST00000442216 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
CSNK1E-210ENST00000442216 SS18Q15532 418 aa9.85□□□□□ -0.83
CSNK1E-210ENST00000442216 CHCHD10Q8WYQ3 142 aaPredicted RBP9.85□□□□□ -0.83
CSNK1E-210ENST00000442216 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
CSNK1E-210ENST00000442216 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.84□□□□□ -0.83
CSNK1E-210ENST00000442216 KRTAP10-1P60331 282 aa9.84□□□□□ -0.83
CSNK1E-210ENST00000442216 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
CSNK1E-210ENST00000442216 MRPS36P82909 103 aaKnown RBP9.84□□□□□ -0.83
CSNK1E-210ENST00000442216 KIAA1644Q3SXP7 199 aa9.84□□□□□ -0.83
CSNK1E-210ENST00000442216 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
CSNK1E-210ENST00000442216 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
CSNK1E-210ENST00000442216 CFAP161Q6P656 301 aa9.83□□□□□ -0.84
CSNK1E-210ENST00000442216 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
CSNK1E-210ENST00000442216 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
CSNK1E-210ENST00000442216 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 C1orf196B1AJZ1 125 aa9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 PRSS1P07477 247 aa9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 G0S2P27469 103 aa9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 IFI27P40305 119 aaPredicted RBP9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 SLC7A5P1Q8MH63 180 aa9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 ALKBH7Q9BT30 221 aaPredicted RBP9.82□□□□□ -0.84
CSNK1E-210ENST00000442216 FABP9Q0Z7S8 132 aa9.81□□□□□ -0.84
CSNK1E-210ENST00000442216 FOXI1Q12951 378 aa9.81□□□□□ -0.84
CSNK1E-210ENST00000442216 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
CSNK1E-210ENST00000442216 Q6ZUT4 128 aa9.81□□□□□ -0.84
CSNK1E-210ENST00000442216 NPSP0C0P6 89 aa9.8□□□□□ -0.84
CSNK1E-210ENST00000442216 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
CSNK1E-210ENST00000442216 CYSLTR1Q9Y271 337 aa9.8□□□□□ -0.84
CSNK1E-210ENST00000442216 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
CSNK1E-210ENST00000442216 LINC01546A6NGU7 62 aa9.79□□□□□ -0.84
CSNK1E-210ENST00000442216 XCL1P47992 114 aa9.79□□□□□ -0.84
CSNK1E-210ENST00000442216 C2orf66Q6UXQ4 117 aa9.79□□□□□ -0.84
CSNK1E-210ENST00000442216 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
CSNK1E-210ENST00000442216 hDV102S1A0JD36 115 aa9.78□□□□□ -0.84
CSNK1E-210ENST00000442216 CNBPP62633 177 aaKnown RBP9.78□□□□□ -0.84
CSNK1E-210ENST00000442216 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
CSNK1E-210ENST00000442216 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
CSNK1E-210ENST00000442216 YPEL4Q96NS1 127 aa9.78□□□□□ -0.84
CSNK1E-210ENST00000442216 AP5S1Q9NUS5 200 aa9.78□□□□□ -0.84
CSNK1E-210ENST00000442216 TRAV13-1A0A0B4J241 112 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 LINC01549A6NIU2 74 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 XGP55808 180 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 Q6ZSA8 131 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 SMCO4Q9NRQ5 59 aa9.77□□□□□ -0.85
CSNK1E-210ENST00000442216 DNAH5Q8TE73 4624 aa9.76□□□□□ -0.85
CSNK1E-210ENST00000442216 LRP1BQ9NZR2 4599 aa9.76□□□□□ -0.85
CSNK1E-210ENST00000442216 IGLV4-3A0A075B6K6 122 aa9.76□□□□□ -0.85
CSNK1E-210ENST00000442216 GVQW2A0A096LPI5 108 aaPredicted RBP9.76□□□□□ -0.85
CSNK1E-210ENST00000442216 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
CSNK1E-210ENST00000442216 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
CSNK1E-210ENST00000442216 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
CSNK1E-210ENST00000442216 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
CSNK1E-210ENST00000442216 KIAA1109Q2LD37 5005 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 PAPPA-AS1Q5QFB9 102 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 Q6ZN92 141 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 TEX43Q6ZNM6 134 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 TIMM17AQ99595 171 aa9.74□□□□□ -0.85
CSNK1E-210ENST00000442216 COX7A2LO14548 114 aa9.73□□□□□ -0.85
CSNK1E-210ENST00000442216 FA2HQ7L5A8 372 aa9.73□□□□□ -0.85
CSNK1E-210ENST00000442216 C18orf32Q8TCD1 76 aa9.73□□□□□ -0.85
CSNK1E-210ENST00000442216 AMELXQ99217 191 aa9.73□□□□□ -0.85
CSNK1E-210ENST00000442216 C2orf88Q9BSF0 95 aa9.73□□□□□ -0.85
CSNK1E-210ENST00000442216 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
CSNK1E-210ENST00000442216 IGHV3OR16-9A0A0B4J2B5 98 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 APOMO95445 188 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 SLPIP03973 132 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 MALP21145 153 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 LINC01620Q4KN68 170 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 HIGD2BQ4VC39 106 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 ERASQ7Z444 233 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 Q8N1X5 172 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 VCX2Q9H322 139 aa9.72□□□□□ -0.85
CSNK1E-210ENST00000442216 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
CSNK1E-210ENST00000442216 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms