RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
SGMS1-203ENST00000429490 TRBV6-5A0A0K0K1A5 114 aa10.12□□□□□ -0.79
SGMS1-203ENST00000429490 C18orf65Q6ZTR6 163 aa10.12□□□□□ -0.79
SGMS1-203ENST00000429490 NDUFA7O95182 113 aa10.12□□□□□ -0.79
SGMS1-203ENST00000429490 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
SGMS1-203ENST00000429490 ITPR1Q14643 2758 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 MIAQ16674 131 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 Q9HAA7 133 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 BAALC-AS2P0C853 105 aa10.11□□□□□ -0.79
SGMS1-203ENST00000429490 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
SGMS1-203ENST00000429490 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
SGMS1-203ENST00000429490 FLNCQ14315 2725 aa10.1□□□□□ -0.79
SGMS1-203ENST00000429490 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
SGMS1-203ENST00000429490 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
SGMS1-203ENST00000429490 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
SGMS1-203ENST00000429490 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
SGMS1-203ENST00000429490 CELSR1Q9NYQ6 3014 aa10.09□□□□□ -0.79
SGMS1-203ENST00000429490 PIK3CD-AS1Q5SR53 167 aa10.09□□□□□ -0.79
SGMS1-203ENST00000429490 CLPSL2Q6UWE3 100 aa10.09□□□□□ -0.79
SGMS1-203ENST00000429490 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
SGMS1-203ENST00000429490 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 PSMB8P28062 276 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 HERVK_113P63121 156 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 EDA2RQ9HAV5 297 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 NXPH4O95158 308 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
SGMS1-203ENST00000429490 C5orf38Q86SI9 138 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 HRNRQ86YZ3 2850 aaPredicted RBP10.08□□□□□ -0.8
SGMS1-203ENST00000429490 H7C423 109 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
SGMS1-203ENST00000429490 A0A096LPF7 62 aa10.07□□□□□ -0.8
SGMS1-203ENST00000429490 VPS13CQ709C8 3753 aa10.07□□□□□ -0.8
SGMS1-203ENST00000429490 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
SGMS1-203ENST00000429490 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
SGMS1-203ENST00000429490 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
SGMS1-203ENST00000429490 Q6ZSN1 163 aa10.07□□□□□ -0.8
SGMS1-203ENST00000429490 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
SGMS1-203ENST00000429490 H3BT86 120 aa10.06□□□□□ -0.8
SGMS1-203ENST00000429490 HIST1H4AP62805 103 aaKnown RBP10.06□□□□□ -0.8
SGMS1-203ENST00000429490 Q6ZTI0 123 aa10.05□□□□□ -0.8
SGMS1-203ENST00000429490 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
SGMS1-203ENST00000429490 CRYBG3Q68DQ2 2970 aa10.04□□□□□ -0.8
SGMS1-203ENST00000429490 ATP5G1P05496 136 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
SGMS1-203ENST00000429490 LINC00308Q8TCZ7 52 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 CHD6Q8TD26 2715 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 PRB1P04280 392 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 RBMY1A1P0DJD3 496 aaKnown RBP10.03□□□□□ -0.8
SGMS1-203ENST00000429490 RBMY1CP0DJD4 496 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 DAZ2Q13117 558 aaKnown RBP10.03□□□□□ -0.8
SGMS1-203ENST00000429490 RBMY1FQ15415 496 aaKnown RBP10.03□□□□□ -0.8
SGMS1-203ENST00000429490 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
SGMS1-203ENST00000429490 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 FAM19A4Q96LR4 140 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
SGMS1-203ENST00000429490 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
SGMS1-203ENST00000429490 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.8
SGMS1-203ENST00000429490 HTN3P15516 51 aa10.02□□□□□ -0.8
SGMS1-203ENST00000429490 SND1-IT1Q9HBX3 110 aa10.02□□□□□ -0.81
SGMS1-203ENST00000429490 COX6A2Q02221 97 aa10.01□□□□□ -0.81
SGMS1-203ENST00000429490 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
SGMS1-203ENST00000429490 RBMY1BA6NDE4 496 aaKnown RBP10.01□□□□□ -0.81
SGMS1-203ENST00000429490 RBMY1EA6NEQ0 496 aaKnown RBP10.01□□□□□ -0.81
SGMS1-203ENST00000429490 RBMY1DP0C7P1 496 aaKnown RBP10.01□□□□□ -0.81
SGMS1-203ENST00000429490 PYGO1Q9Y3Y4 419 aa10.01□□□□□ -0.81
SGMS1-203ENST00000429490 LST1O00453 97 aa10.01□□□□□ -0.81
SGMS1-203ENST00000429490 XCL1P47992 114 aa10.01□□□□□ -0.81
SGMS1-203ENST00000429490 DSCR9P59020 149 aa10.01□□□□□ -0.81
SGMS1-203ENST00000429490 AMELXQ99217 191 aa10□□□□□ -0.81
SGMS1-203ENST00000429490 LINC00694P0DN24 101 aa10□□□□□ -0.81
SGMS1-203ENST00000429490 UTP20O75691 2785 aaKnown RBP10□□□□□ -0.81
SGMS1-203ENST00000429490 HERV-K104P63124 156 aa10□□□□□ -0.81
SGMS1-203ENST00000429490 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
SGMS1-203ENST00000429490 Q96MF0 132 aa9.99□□□□□ -0.81
SGMS1-203ENST00000429490 INAFM2P0DMQ5 153 aa9.99□□□□□ -0.81
SGMS1-203ENST00000429490 CHCHD7Q9BUK0 85 aa9.99□□□□□ -0.81
SGMS1-203ENST00000429490 K7EQD1 137 aa9.98□□□□□ -0.81
SGMS1-203ENST00000429490 COX7A2LO14548 114 aa9.98□□□□□ -0.81
SGMS1-203ENST00000429490 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 LECT2O14960 151 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 SPANXCQ9NY87 97 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
SGMS1-203ENST00000429490 NDUFA1O15239 70 aa9.96□□□□□ -0.81
SGMS1-203ENST00000429490 SLPIP03973 132 aa9.96□□□□□ -0.81
SGMS1-203ENST00000429490 LINC00242Q5T6M2 205 aa9.96□□□□□ -0.81
SGMS1-203ENST00000429490 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.81
SGMS1-203ENST00000429490 MALP21145 153 aa9.96□□□□□ -0.82
SGMS1-203ENST00000429490 CFAP161Q6P656 301 aa9.96□□□□□ -0.82
SGMS1-203ENST00000429490 IGLV10-54A0A075B6I4 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms