RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 Q8N8P6 123 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 MYOZ3Q8TDC0 251 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 NDUFA4L2Q9NRX3 87 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 UQCR10Q9UDW1 63 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 LINC01558Q9Y6Z2 57 aa-0.32□□□□□ -2.46
TIMM9P3-201ENST00000428659 LPAP08519 4548 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 IGLC7A0M8Q6 106 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 SFT2D2O95562 160 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 APOC2P02655 101 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 COX8AP10176 69 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 SPRR1BP22528 89 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 BTG2P78543 158 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 CCDC58Q4VC31 144 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 MRPL54Q6P161 138 aaKnown RBP-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 DEFB123Q8N688 67 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 FXYD6Q9H0Q3 95 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 DCHS2Q6V1P9 2916 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 VWFP04275 2813 aa-0.33□□□□□ -2.46
TIMM9P3-201ENST00000428659 TRBV7-4A0A0J9YYF1 115 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 SYS1-DBNDD2H3BUS1 97 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 HMGN4O00479 90 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 CEP152O94986 1710 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 MEIG1Q5JSS6 88 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 USMG5Q96IX5 58 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 SPANXDQ9BXN6 97 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 LINC00472Q9H8W2 130 aa-0.34□□□□□ -2.46
TIMM9P3-201ENST00000428659 APC2O95996 2303 aa-0.35□□□□□ -2.46
TIMM9P3-201ENST00000428659 GAPVD1Q14C86 1478 aa-0.35□□□□□ -2.46
TIMM9P3-201ENST00000428659 M0R2T5 61 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 FGF7P21781 194 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 UBA52P62987 128 aaKnown RBP-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 KRTAP19-7Q3SYF9 63 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 COMMD6Q7Z4G1 85 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 LINC00470Q9BZP3 86 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 PLCE1Q9P212 2302 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 CSMD3Q7Z407 3707 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 PAPPAQ13219 1627 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 SRRM2Q9UQ35 2752 aaKnown RBP-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 SPTBN1Q01082 2364 aaKnown RBP-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 PRDM2Q13029 1718 aa-0.35□□□□□ -2.47
TIMM9P3-201ENST00000428659 USF3Q68DE3 2245 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 KMT2AQ03164 3969 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 FSIP2Q5CZC0 6907 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 MUC2Q02817 5179 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 MYH6P13533 1939 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 MIF4GDA9UHW6 222 aaKnown RBP-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 PI4KAP42356 2102 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 LSM10Q969L4 123 aaKnown RBP-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 TSC22D3Q99576 134 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 PRO1933Q9H354 126 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 RAPGEF6Q8TEU7 1601 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 KTN1Q86UP2 1357 aaKnown RBP-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 SETBP1Q9Y6X0 1596 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 CHD6Q8TD26 2715 aa-0.36□□□□□ -2.47
TIMM9P3-201ENST00000428659 MYO7BQ6PIF6 2116 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 CPSF1Q10570 1443 aaKnown RBP-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 CHKB-CPT1BH3BT56 60 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 ATP5EP56381 51 aaPredicted RBP-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 CATR1Q13166 79 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 FDCSPQ8NFU4 85 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 DEFB105AQ8NG35 78 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 C1orf54Q8WWF1 131 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 PLXNB2O15031 1838 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 PIEZO2Q9H5I5 2752 aa-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 EP300Q09472 2414 aaPredicted RBP-0.37□□□□□ -2.47
TIMM9P3-201ENST00000428659 LAMC1P11047 1609 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 ARAP2Q8WZ64 1704 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 COL6A3P12111 3177 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 CSPG4Q6UVK1 2322 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 LOC105371267A0A1B0GV96 52 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 F6UZH7 168 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 GNG7O60262 68 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 IGLC1P0CG04 106 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 TSLPQ969D9 159 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 CCDC141Q6ZP82 1450 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 KIF21AQ7Z4S6 1674 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 ALMS1Q8TCU4 4167 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 GOLGA4Q13439 2230 aaKnown RBP-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 SBF2Q86WG5 1849 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 SPEF2Q9C093 1822 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 ARHGEF12Q9NZN5 1544 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 NSD3Q9BZ95 1437 aa-0.38□□□□□ -2.47
TIMM9P3-201ENST00000428659 SYNE2Q8WXH0 6885 aaKnown RBP-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 MAP1BP46821 2468 aaKnown RBP-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 PDZD2O15018 2839 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 RIMS1Q86UR5 1692 aaKnown RBP-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 ACANP16112 2415 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 UBE2L5PA0A1B0GUS4 154 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 FAM24AA6NFZ4 105 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 COX6CP09669 75 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 AKAIN1P0CW23 69 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 UBE2L3P68036 154 aaKnown RBP-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 S100A12P80511 92 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 C9orf153Q5TBE3 101 aa-0.39□□□□□ -2.47
TIMM9P3-201ENST00000428659 C10orf113Q5VZT2 155 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms