RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 TMEM89A2RUT3 159 aa8.49□□□□□ -1.05
POLR2J4-202ENST00000427076 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
POLR2J4-202ENST00000427076 PCDH15Q96QU1 1955 aa8.49□□□□□ -1.05
POLR2J4-202ENST00000427076 IBA57-AS1B1ANH7 110 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 C7orf33Q8WU49 177 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 Q8N7P7 452 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 PRYO14603 147 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 RNASE3P12724 160 aaKnown RBP8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 VWA8A3KMH1 1905 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 NOTCH3Q9UM47 2321 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 INAFM1C9JVW0 142 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 PRM2P04554 102 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 LINC00482Q8N8I6 264 aa8.48□□□□□ -1.05
POLR2J4-202ENST00000427076 RLFQ13129 1914 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 LINC01548A6NM66 108 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 SYCNQ0VAF6 134 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 ODF3L1Q8IXM7 274 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 COL6A6A6NMZ7 2263 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 IGLV2-14P01704 120 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 ZNF843Q8N446 348 aa8.47□□□□□ -1.05
POLR2J4-202ENST00000427076 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
POLR2J4-202ENST00000427076 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
POLR2J4-202ENST00000427076 IGLV2-8P01709 118 aa8.45□□□□□ -1.06
POLR2J4-202ENST00000427076 PLAC8L1A1L4L8 177 aa8.45□□□□□ -1.06
POLR2J4-202ENST00000427076 LY6G6CO95867 125 aa8.45□□□□□ -1.06
POLR2J4-202ENST00000427076 WNK2Q9Y3S1 2297 aa8.45□□□□□ -1.06
POLR2J4-202ENST00000427076 A6NDX4 124 aa8.45□□□□□ -1.06
POLR2J4-202ENST00000427076 CNOT1A5YKK6 2376 aaKnown RBP8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 IGHV6-1A0A0B4J1U7 121 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 LOC100131303A0A0U1RQF7 123 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 TRBV6-8A0A0A6YYG3 113 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 PLXNA4Q9HCM2 1894 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 A0A087WYN8 130 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 MBD6Q96DN6 1003 aa8.44□□□□□ -1.06
POLR2J4-202ENST00000427076 PRR3P79522 188 aaKnown RBP8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 ZGRF1Q86YA3 2104 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 BBC3Q96PG8 261 aaPredicted RBP8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 DHRS4-AS1Q9P1J3 65 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 DAZAP2Q15038 168 aaPredicted RBP8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 PKDREJQ9NTG1 2253 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 EDN2P20800 178 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 PLXNA2O75051 1894 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 DENND4CQ5VZ89 1909 aa8.43□□□□□ -1.06
POLR2J4-202ENST00000427076 M0R378 163 aa8.42□□□□□ -1.06
POLR2J4-202ENST00000427076 TRBV7-7A0A0K0K1E9 115 aa8.42□□□□□ -1.06
POLR2J4-202ENST00000427076 LST1O00453 97 aa8.42□□□□□ -1.06
POLR2J4-202ENST00000427076 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
POLR2J4-202ENST00000427076 CACNA1BQ00975 2339 aa8.42□□□□□ -1.06
POLR2J4-202ENST00000427076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.42□□□□□ -1.064e-6■■■□□ 16.8
POLR2J4-202ENST00000427076 ROS1P08922 2347 aa8.41□□□□□ -1.06
POLR2J4-202ENST00000427076 PRLHP81277 87 aa8.41□□□□□ -1.06
POLR2J4-202ENST00000427076 M0QY20 66 aa8.41□□□□□ -1.06
POLR2J4-202ENST00000427076 Q6JHZ5 121 aa8.41□□□□□ -1.06
POLR2J4-202ENST00000427076 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.06
POLR2J4-202ENST00000427076 IGFL2Q6UWQ7 119 aa8.4□□□□□ -1.06
POLR2J4-202ENST00000427076 C10orf25Q5T742 122 aa8.4□□□□□ -1.06
POLR2J4-202ENST00000427076 RNF185Q96GF1 192 aa8.4□□□□□ -1.06
POLR2J4-202ENST00000427076 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.07
POLR2J4-202ENST00000427076 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
POLR2J4-202ENST00000427076 PRO0628Q9UI54 55 aa8.39□□□□□ -1.07
POLR2J4-202ENST00000427076 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
POLR2J4-202ENST00000427076 CRIP1P50238 77 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 IGLV1-47P01700 117 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 TANC1Q9C0D5 1861 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 C19orf84I3L1E1 186 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 KRTAP27-1Q3LI81 207 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 Q6YL49 198 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 SBSPONQ8IVN8 264 aa8.38□□□□□ -1.07
POLR2J4-202ENST00000427076 PYGO1Q9Y3Y4 419 aa8.37□□□□□ -1.07
POLR2J4-202ENST00000427076 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
POLR2J4-202ENST00000427076 TSHBP01222 138 aa8.37□□□□□ -1.07
POLR2J4-202ENST00000427076 DEFB114Q30KQ6 69 aa8.36□□□□□ -1.07
POLR2J4-202ENST00000427076 LINC00959A0A1B0GUT2 108 aa8.36□□□□□ -1.07
POLR2J4-202ENST00000427076 C10orf99Q6UWK7 81 aa8.36□□□□□ -1.07
POLR2J4-202ENST00000427076 PRORYQ9H606 182 aa8.36□□□□□ -1.07
POLR2J4-202ENST00000427076 NLRC5Q86WI3 1866 aa8.36□□□□□ -1.07
POLR2J4-202ENST00000427076 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 NTM-AS1Q6ZSK4 140 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 TNCP24821 2201 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 H0Y9P7 68 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 LY6G6DO95868 133 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 Q8N3U1 123 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
POLR2J4-202ENST00000427076 A8MTW9 85 aa8.34□□□□□ -1.07
POLR2J4-202ENST00000427076 ACACAQ13085 2346 aa8.34□□□□□ -1.07
POLR2J4-202ENST00000427076 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
POLR2J4-202ENST00000427076 K7EQG2 157 aa8.34□□□□□ -1.07
POLR2J4-202ENST00000427076 FSHBP01225 129 aa8.34□□□□□ -1.08
POLR2J4-202ENST00000427076 C1orf137Q5JT78 98 aa8.34□□□□□ -1.08
POLR2J4-202ENST00000427076 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
POLR2J4-202ENST00000427076 U3KQK5 164 aa8.33□□□□□ -1.08
POLR2J4-202ENST00000427076 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
POLR2J4-202ENST00000427076 ZNF580Q9UK33 172 aa8.33□□□□□ -1.08
POLR2J4-202ENST00000427076 KIF26AQ9ULI4 1882 aaPredicted RBP8.33□□□□□ -1.08
POLR2J4-202ENST00000427076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.33□□□□□ -1.08
POLR2J4-202ENST00000427076 TRBV6-4A0A1B0GX49 114 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms