RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 HINT1P49773 126 aaPredicted RBP12.15□□□□□ -0.46
FN1-208ENST00000426059 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
FN1-208ENST00000426059 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
FN1-208ENST00000426059 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
FN1-208ENST00000426059 IGKV2D-26A0A0A0MRZ7 120 aa12.14□□□□□ -0.47
FN1-208ENST00000426059 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
FN1-208ENST00000426059 VCX2Q9H322 139 aa12.14□□□□□ -0.47
FN1-208ENST00000426059 A0A0J9YWU9 116 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 PLNP26678 52 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 NMUP48645 174 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 UBE2V1Q13404 147 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 Q6ZUT4 128 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 C11orf86A6NJI1 115 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 RBX1P62877 108 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 Q6ZVH6 145 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 TTTY13Q9BZ97 58 aa12.13□□□□□ -0.47
FN1-208ENST00000426059 KPRPQ5T749 579 aaPredicted RBP12.12□□□□□ -0.47
FN1-208ENST00000426059 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
FN1-208ENST00000426059 FGF6P10767 208 aa12.11□□□□□ -0.47
FN1-208ENST00000426059 PCP2Q8IVA1 136 aa12.11□□□□□ -0.47
FN1-208ENST00000426059 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
FN1-208ENST00000426059 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
FN1-208ENST00000426059 SPANXA1Q9NS26 97 aa12.11□□□□□ -0.47
FN1-208ENST00000426059 TRBV25-1A0A075B6N4 114 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 TMEM243Q9BU79 118 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 K7EP13 123 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 GAGE6Q13070 117 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 Q6ZTC4 211 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 AMELXQ99217 191 aa12.1□□□□□ -0.47
FN1-208ENST00000426059 SLC25A34Q6PIV7 304 aa12.09□□□□□ -0.47
FN1-208ENST00000426059 UBE2L6O14933 153 aa12.08□□□□□ -0.47
FN1-208ENST00000426059 COX8AP10176 69 aa12.08□□□□□ -0.47
FN1-208ENST00000426059 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
FN1-208ENST00000426059 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
FN1-208ENST00000426059 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
FN1-208ENST00000426059 CHAC1Q9BUX1 264 aa12.07□□□□□ -0.48
FN1-208ENST00000426059 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
FN1-208ENST00000426059 PAPPA-AS1Q5QFB9 102 aa12.07□□□□□ -0.48
FN1-208ENST00000426059 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
FN1-208ENST00000426059 HUWE1Q7Z6Z7 4374 aaKnown RBP12.06□□□□□ -0.48
FN1-208ENST00000426059 COL7A1Q02388 2944 aa12.06□□□□□ -0.48
FN1-208ENST00000426059 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
FN1-208ENST00000426059 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
FN1-208ENST00000426059 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
FN1-208ENST00000426059 DNHD1Q96M86 4753 aa12.06□□□□□ -0.48
FN1-208ENST00000426059 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
FN1-208ENST00000426059 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
FN1-208ENST00000426059 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
FN1-208ENST00000426059 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
FN1-208ENST00000426059 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
FN1-208ENST00000426059 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
FN1-208ENST00000426059 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
FN1-208ENST00000426059 C11orf45Q8TAV5 145 aa12.04□□□□□ -0.48
FN1-208ENST00000426059 CDC42SE2Q9NRR3 84 aa12.04□□□□□ -0.48
FN1-208ENST00000426059 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
FN1-208ENST00000426059 VAMP3Q15836 100 aa12.03□□□□□ -0.48
FN1-208ENST00000426059 BOD1L2Q8IYS8 172 aa12.03□□□□□ -0.48
FN1-208ENST00000426059 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
FN1-208ENST00000426059 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
FN1-208ENST00000426059 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.49
FN1-208ENST00000426059 C2orf91Q6ZV80 131 aa12.02□□□□□ -0.49
FN1-208ENST00000426059 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.49
FN1-208ENST00000426059 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
FN1-208ENST00000426059 RNF151Q2KHN1 245 aa12.01□□□□□ -0.49
FN1-208ENST00000426059 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
FN1-208ENST00000426059 UBE2D1P51668 147 aa12.01□□□□□ -0.49
FN1-208ENST00000426059 MRPL23Q16540 153 aaKnown RBP12.01□□□□□ -0.49
FN1-208ENST00000426059 MPV17L2Q567V2 206 aa12□□□□□ -0.49
FN1-208ENST00000426059 Q8N3U1 123 aa12□□□□□ -0.49
FN1-208ENST00000426059 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
FN1-208ENST00000426059 E9PLD3 99 aa12□□□□□ -0.49
FN1-208ENST00000426059 COX6A2Q02221 97 aa12□□□□□ -0.49
FN1-208ENST00000426059 TMEM97Q5BJF2 176 aa12□□□□□ -0.49
FN1-208ENST00000426059 H7C423 109 aa11.99□□□□□ -0.49
FN1-208ENST00000426059 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
FN1-208ENST00000426059 DEFB131BA0A096LNP1 70 aa11.98□□□□□ -0.49
FN1-208ENST00000426059 TINCRA0A1B0GVN0 87 aa11.98□□□□□ -0.49
FN1-208ENST00000426059 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
FN1-208ENST00000426059 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
FN1-208ENST00000426059 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
FN1-208ENST00000426059 GEMIN7Q9H840 131 aaKnown RBP11.97□□□□□ -0.49
FN1-208ENST00000426059 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
FN1-208ENST00000426059 HERVK_113P61574 105 aa11.97□□□□□ -0.49
FN1-208ENST00000426059 CDKN2A-AS1Q9UH64 79 aa11.97□□□□□ -0.49
FN1-208ENST00000426059 SMAGPQ0VAQ4 97 aa11.96□□□□□ -0.49
FN1-208ENST00000426059 SPINK8P0C7L1 97 aa11.96□□□□□ -0.5
FN1-208ENST00000426059 BVES-AS1Q5T3Y7 98 aa11.96□□□□□ -0.5
FN1-208ENST00000426059 CLPSL2Q6UWE3 100 aa11.96□□□□□ -0.5
FN1-208ENST00000426059 DNAH9Q9NYC9 4486 aa11.95□□□□□ -0.5
FN1-208ENST00000426059 STAB2Q8WWQ8 2551 aa11.95□□□□□ -0.5
FN1-208ENST00000426059 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
FN1-208ENST00000426059 VPS25Q9BRG1 176 aa11.94□□□□□ -0.5
FN1-208ENST00000426059 ZNF815PA8K554 130 aa11.93□□□□□ -0.5
FN1-208ENST00000426059 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
FN1-208ENST00000426059 MYMXA0A1B0GTQ4 84 aa11.93□□□□□ -0.5
FN1-208ENST00000426059 J3QQQ9 107 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms