RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
PHRF1-203ENST00000416188 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
PHRF1-203ENST00000416188 IGLV1-40P01703 118 aa11.61□□□□□ -0.55
PHRF1-203ENST00000416188 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
PHRF1-203ENST00000416188 CRIP1P50238 77 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 JMJD7-PLA2G4BH0Y9G9 81 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 MTORP42345 2549 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 A0A1B0GX51 115 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 LY6G6CO95867 125 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 LINC00467Q9BRT7 94 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
PHRF1-203ENST00000416188 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
PHRF1-203ENST00000416188 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
PHRF1-203ENST00000416188 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
PHRF1-203ENST00000416188 H3BT86 120 aa11.59□□□□□ -0.55
PHRF1-203ENST00000416188 NDUFB1O75438 58 aa11.59□□□□□ -0.55
PHRF1-203ENST00000416188 MIAQ16674 131 aa11.59□□□□□ -0.55
PHRF1-203ENST00000416188 REG3AQ06141 175 aa11.58□□□□□ -0.56
PHRF1-203ENST00000416188 SMIM20Q8N5G0 67 aa11.58□□□□□ -0.56
PHRF1-203ENST00000416188 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
PHRF1-203ENST00000416188 IGHV4-30-4P0DP06 118 aa11.58□□□□□ -0.56
PHRF1-203ENST00000416188 EML5Q05BV3 1969 aa11.57□□□□□ -0.56
PHRF1-203ENST00000416188 TNRC6BQ9UPQ9 1833 aaKnown RBP11.57□□□□□ -0.56
PHRF1-203ENST00000416188 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
PHRF1-203ENST00000416188 NEXN-AS1Q8NBZ9 246 aa11.56□□□□□ -0.56
PHRF1-203ENST00000416188 C14orf177Q52M58 125 aa11.56□□□□□ -0.56
PHRF1-203ENST00000416188 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
PHRF1-203ENST00000416188 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
PHRF1-203ENST00000416188 CRYGDP07320 174 aa11.55□□□□□ -0.56
PHRF1-203ENST00000416188 IGLV2-18A0A075B6J9 118 aa11.55□□□□□ -0.56
PHRF1-203ENST00000416188 TCL1BO95988 128 aa11.55□□□□□ -0.56
PHRF1-203ENST00000416188 SPANXCQ9NY87 97 aa11.55□□□□□ -0.56
PHRF1-203ENST00000416188 H3BQ85 93 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 TMEM258P61165 79 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 TMEM256-PLSCR3K7ERE1 68 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 ATOX1O00244 68 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 COX7BP24311 80 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 PROK1P58294 105 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
PHRF1-203ENST00000416188 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
PHRF1-203ENST00000416188 C14orf132Q9NPU4 83 aa11.54□□□□□ -0.56
PHRF1-203ENST00000416188 M0QY20 66 aa11.53□□□□□ -0.56
PHRF1-203ENST00000416188 M0R2N4 97 aa11.53□□□□□ -0.56
PHRF1-203ENST00000416188 CFAP126Q5VTH2 177 aa11.53□□□□□ -0.56
PHRF1-203ENST00000416188 UFSP1Q6NVU6 142 aa11.53□□□□□ -0.56
PHRF1-203ENST00000416188 MP68P56378 58 aa11.53□□□□□ -0.56
PHRF1-203ENST00000416188 Q8N976 141 aa11.52□□□□□ -0.56
PHRF1-203ENST00000416188 RNF185Q96GF1 192 aa11.52□□□□□ -0.57
PHRF1-203ENST00000416188 IGLV2-11P01706 119 aa11.51□□□□□ -0.57
PHRF1-203ENST00000416188 HIGD2AQ9BW72 106 aa11.51□□□□□ -0.57
PHRF1-203ENST00000416188 HCFC1P51610 2035 aa11.51□□□□□ -0.57
PHRF1-203ENST00000416188 A0A0J9YWU9 116 aa11.51□□□□□ -0.57
PHRF1-203ENST00000416188 ACANP16112 2415 aa11.5□□□□□ -0.57
PHRF1-203ENST00000416188 C5orf47Q569G3 176 aa11.5□□□□□ -0.57
PHRF1-203ENST00000416188 UTRNP46939 3433 aa11.5□□□□□ -0.57
PHRF1-203ENST00000416188 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
PHRF1-203ENST00000416188 COL4A2P08572 1712 aa11.49□□□□□ -0.57
PHRF1-203ENST00000416188 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
PHRF1-203ENST00000416188 RBX1P62877 108 aa11.49□□□□□ -0.57
PHRF1-203ENST00000416188 F8P00451 2351 aa11.49□□□□□ -0.57
PHRF1-203ENST00000416188 WFDC9Q8NEX5 89 aa11.49□□□□□ -0.57
PHRF1-203ENST00000416188 C4orf48Q5BLP8 95 aa11.48□□□□□ -0.57
PHRF1-203ENST00000416188 PIK3CD-AS1Q5SR53 167 aa11.48□□□□□ -0.57
PHRF1-203ENST00000416188 TRBV6-8A0A0A6YYG3 113 aa11.48□□□□□ -0.57
PHRF1-203ENST00000416188 ADAMTS20P59510 1910 aa11.48□□□□□ -0.57
PHRF1-203ENST00000416188 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
PHRF1-203ENST00000416188 XAGE1AQ9HD64 81 aa11.47□□□□□ -0.57
PHRF1-203ENST00000416188 C11orf21Q9P2W6 132 aa11.47□□□□□ -0.57
PHRF1-203ENST00000416188 PRR9Q5T870 116 aa11.47□□□□□ -0.57
PHRF1-203ENST00000416188 A0A096LNI7 61 aa11.47□□□□□ -0.57
PHRF1-203ENST00000416188 KPRPQ5T749 579 aaPredicted RBP11.46□□□□□ -0.57
PHRF1-203ENST00000416188 RNASE3P12724 160 aaKnown RBP11.46□□□□□ -0.57
PHRF1-203ENST00000416188 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.58
PHRF1-203ENST00000416188 H0Y9J4 135 aa11.46□□□□□ -0.58
PHRF1-203ENST00000416188 PRM2P04554 102 aa11.46□□□□□ -0.58
PHRF1-203ENST00000416188 LINC00308Q8TCZ7 52 aa11.46□□□□□ -0.58
PHRF1-203ENST00000416188 RETNQ9HD89 108 aa11.46□□□□□ -0.58
PHRF1-203ENST00000416188 TRBV27A0A0K0K1C4 114 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 IGLV1-51P01701 117 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 PDE6GP18545 87 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 U3KQK5 164 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 HECTD1Q9ULT8 2610 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 CHKB-CPT1BH3BT56 60 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 TEX49A0A1B0GTD5 131 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 A8MZ25 164 aa11.45□□□□□ -0.58
PHRF1-203ENST00000416188 H7C423 109 aa11.44□□□□□ -0.58
PHRF1-203ENST00000416188 NUPR2A6NF83 97 aa11.44□□□□□ -0.58
PHRF1-203ENST00000416188 SLPIP03973 132 aa11.44□□□□□ -0.58
PHRF1-203ENST00000416188 MT-ATP8P03928 68 aa11.44□□□□□ -0.58
PHRF1-203ENST00000416188 RAI1Q7Z5J4 1906 aaPredicted RBP11.44□□□□□ -0.58
PHRF1-203ENST00000416188 LINC00643Q86TS7 51 aa11.44□□□□□ -0.58
PHRF1-203ENST00000416188 IBA57-AS1B1ANH7 110 aa11.43□□□□□ -0.58
PHRF1-203ENST00000416188 B9D2Q9BPU9 175 aa11.43□□□□□ -0.58
PHRF1-203ENST00000416188 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.43□□□□□ -0.58
PHRF1-203ENST00000416188 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
PHRF1-203ENST00000416188 NRACQ8N912 160 aa11.42□□□□□ -0.58
PHRF1-203ENST00000416188 TRBV6-5A0A0K0K1A5 114 aa11.42□□□□□ -0.58
PHRF1-203ENST00000416188 BPY2O14599 106 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms