RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 C2orf66Q6UXQ4 117 aa20.4■□□□□ 0.86
CSNK1E-206ENST00000413574 OPRPNQ99935 248 aaPredicted RBP20.4■□□□□ 0.86
CSNK1E-206ENST00000413574 PRSS29PA6NIE9 313 aa20.39■□□□□ 0.86
CSNK1E-206ENST00000413574 ZNF664Q8N3J9 261 aa20.39■□□□□ 0.86
CSNK1E-206ENST00000413574 TIMM21Q9BVV7 248 aa20.39■□□□□ 0.86
CSNK1E-206ENST00000413574 CSDC2Q9Y534 153 aaKnown RBP20.39■□□□□ 0.86
CSNK1E-206ENST00000413574 PKD1P98161 4303 aa20.39■□□□□ 0.85
CSNK1E-206ENST00000413574 IGLV10-54A0A075B6I4 117 aa20.38■□□□□ 0.85
CSNK1E-206ENST00000413574 MIAQ16674 131 aa20.38■□□□□ 0.85
CSNK1E-206ENST00000413574 Q6ZUT4 128 aa20.38■□□□□ 0.85
CSNK1E-206ENST00000413574 FAM104AQ969W3 186 aa20.38■□□□□ 0.85
CSNK1E-206ENST00000413574 CYSLTR1Q9Y271 337 aa20.38■□□□□ 0.85
CSNK1E-206ENST00000413574 DNAH11Q96DT5 4516 aa20.37■□□□□ 0.85
CSNK1E-206ENST00000413574 PSCAO43653 123 aa20.37■□□□□ 0.85
CSNK1E-206ENST00000413574 LINC00614P0C842 121 aa20.37■□□□□ 0.85
CSNK1E-206ENST00000413574 SMAGPQ0VAQ4 97 aa20.37■□□□□ 0.85
CSNK1E-206ENST00000413574 LINC00336Q6ZUF6 198 aa20.37■□□□□ 0.85
CSNK1E-206ENST00000413574 SPANXA1Q9NS26 97 aa20.36■□□□□ 0.85
CSNK1E-206ENST00000413574 MAPKAPK5-AS1Q8N8E1 139 aa20.35■□□□□ 0.85
CSNK1E-206ENST00000413574 C1orf43Q9BWL3 253 aa20.35■□□□□ 0.85
CSNK1E-206ENST00000413574 AP5S1Q9NUS5 200 aa20.35■□□□□ 0.85
CSNK1E-206ENST00000413574 RMI2Q96E14 147 aa20.35■□□□□ 0.85
CSNK1E-206ENST00000413574 TM2D2Q9BX73 214 aa20.35■□□□□ 0.85
CSNK1E-206ENST00000413574 TOMM6Q96B49 74 aa20.32■□□□□ 0.84
CSNK1E-206ENST00000413574 PYGO1Q9Y3Y4 419 aa20.32■□□□□ 0.84
CSNK1E-206ENST00000413574 PMCHL1Q16048 86 aa20.31■□□□□ 0.84
CSNK1E-206ENST00000413574 RAB5BP61020 215 aa20.31■□□□□ 0.84
CSNK1E-206ENST00000413574 KRTAP26-1Q6PEX3 210 aa20.31■□□□□ 0.84
CSNK1E-206ENST00000413574 BAGE3Q86Y29 109 aa20.3■□□□□ 0.84
CSNK1E-206ENST00000413574 IGLV4-3A0A075B6K6 122 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 A0A096LNJ9 63 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 TRAV8-4A0A0B4J246 113 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 LINC00959A0A1B0GUT2 108 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 IGIPA6NJ69 53 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 G0S2P27469 103 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 MRPS36P82909 103 aaKnown RBP20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 COX11Q9Y6N1 276 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 EPPK1P58107 5090 aaKnown RBP20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 HECTD4Q9Y4D8 3996 aa20.29■□□□□ 0.84
CSNK1E-206ENST00000413574 BAALCQ8WXS3 180 aa20.27■□□□□ 0.83
CSNK1E-206ENST00000413574 LRCOL1A6NCL2 159 aa20.26■□□□□ 0.83
CSNK1E-206ENST00000413574 LECT2O14960 151 aa20.26■□□□□ 0.83
CSNK1E-206ENST00000413574 WFDC2Q14508 124 aa20.26■□□□□ 0.83
CSNK1E-206ENST00000413574 ZC2HC1BQ5TFG8 222 aa20.26■□□□□ 0.83
CSNK1E-206ENST00000413574 TRAV13-1A0A0B4J241 112 aa20.25■□□□□ 0.83
CSNK1E-206ENST00000413574 CHCHD10Q8WYQ3 142 aaPredicted RBP20.25■□□□□ 0.83
CSNK1E-206ENST00000413574 TMEM141Q96I45 108 aa20.25■□□□□ 0.83
CSNK1E-206ENST00000413574 SCGB3A1Q96QR1 104 aa20.25■□□□□ 0.83
CSNK1E-206ENST00000413574 A0A087WTM6 91 aa20.24■□□□□ 0.83
CSNK1E-206ENST00000413574 CHCHD1Q96BP2 118 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-206ENST00000413574 A0A1B0GVY2 172 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 GAGE12HA6NDE8 117 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 CCL25O15444 150 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BKO60814 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BJP06899 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BOP23527 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BBP33778 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 XCL1P47992 114 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BDP58876 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 LINC00310P59036 64 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BCP62807 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST2H2BEQ16778 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BHQ93079 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BNQ99877 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 HIST1H2BMQ99879 126 aa20.23■□□□□ 0.83
CSNK1E-206ENST00000413574 SS18Q15532 418 aa20.22■□□□□ 0.83
CSNK1E-206ENST00000413574 ERASQ7Z444 233 aa20.22■□□□□ 0.83
CSNK1E-206ENST00000413574 TIMM17AQ99595 171 aa20.22■□□□□ 0.83
CSNK1E-206ENST00000413574 SERF1AO75920 110 aa20.21■□□□□ 0.83
CSNK1E-206ENST00000413574 HBDP02042 147 aa20.21■□□□□ 0.83
CSNK1E-206ENST00000413574 IFITM10A6NMD0 228 aa20.2■□□□□ 0.82
CSNK1E-206ENST00000413574 LINC00173Q6ZV60 143 aa20.2■□□□□ 0.82
CSNK1E-206ENST00000413574 NUPR1O60356 82 aa20.19■□□□□ 0.82
CSNK1E-206ENST00000413574 Q6ZN92 141 aa20.19■□□□□ 0.82
CSNK1E-206ENST00000413574 TEX43Q6ZNM6 134 aa20.19■□□□□ 0.82
CSNK1E-206ENST00000413574 PKHD1P08F94 4074 aa20.18■□□□□ 0.82
CSNK1E-206ENST00000413574 FAM19A2Q8N3H0 131 aa20.18■□□□□ 0.82
CSNK1E-206ENST00000413574 AMELXQ99217 191 aa20.18■□□□□ 0.82
CSNK1E-206ENST00000413574 VCX2Q9H322 139 aa20.18■□□□□ 0.82
CSNK1E-206ENST00000413574 C1orf196B1AJZ1 125 aa20.17■□□□□ 0.82
CSNK1E-206ENST00000413574 NPSP0C0P6 89 aa20.17■□□□□ 0.82
CSNK1E-206ENST00000413574 FOXI1Q12951 378 aa20.17■□□□□ 0.82
CSNK1E-206ENST00000413574 LINC01549A6NIU2 74 aa20.16■□□□□ 0.82
CSNK1E-206ENST00000413574 HSBP1O75506 76 aa20.16■□□□□ 0.82
CSNK1E-206ENST00000413574 FUSP35637 526 aaKnown RBP eCLIP20.16■□□□□ 0.82
CSNK1E-206ENST00000413574 PDZD11Q5EBL8 140 aa20.16■□□□□ 0.82
CSNK1E-206ENST00000413574 DNAH5Q8TE73 4624 aa20.15■□□□□ 0.82
CSNK1E-206ENST00000413574 USP17L23D6RBM5 183 aa20.13■□□□□ 0.81
CSNK1E-206ENST00000413574 EREGO14944 169 aa20.13■□□□□ 0.81
CSNK1E-206ENST00000413574 CD164L2Q6UWJ8 174 aa20.13■□□□□ 0.81
CSNK1E-206ENST00000413574 KRTAP10-2P60368 255 aa20.13■□□□□ 0.81
CSNK1E-206ENST00000413574 Q8N814 137 aa20.13■□□□□ 0.81
CSNK1E-206ENST00000413574 C2orf88Q9BSF0 95 aa20.13■□□□□ 0.81
CSNK1E-206ENST00000413574 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-206ENST00000413574 PAPPA-AS1Q5QFB9 102 aa20.12■□□□□ 0.81
CSNK1E-206ENST00000413574 SPATA12Q7Z6I5 190 aa20.12■□□□□ 0.81
CSNK1E-206ENST00000413574 UBE2D1P51668 147 aa20.11■□□□□ 0.81
CSNK1E-206ENST00000413574 LINC00242Q5T6M2 205 aa20.09■□□□□ 0.81
CSNK1E-206ENST00000413574 COX6A2Q02221 97 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms