RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 MIFP14174 115 aa3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 RHOHQ15669 191 aa3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 CRYBG3Q68DQ2 2970 aa3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 TSLPQ969D9 159 aa3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 RABAC1Q9UI14 185 aa3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 NIPBLQ6KC79 2804 aaeCLIP3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
CBX1P3-201ENST00000413296 COL27A1Q8IZC6 1860 aaPredicted RBP3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 KRTDAPP60985 99 aa3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 Q1T7F1 81 aa3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 KRTAP21-3Q3LHN1 58 aa3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 RPL7L1Q6DKI1 246 aaKnown RBP3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 GFRA4Q9GZZ7 299 aa3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 MYOFQ9NZM1 2061 aa3.59□□□□□ -1.83
CBX1P3-201ENST00000413296 ABCA2Q9BZC7 2435 aa3.59□□□□□ -1.84
CBX1P3-201ENST00000413296 KIAA1549LQ6ZVL6 1849 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 IGKV1D-17A0A075B6S4 117 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 TRAV10A0A0B4J240 114 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 A6NIN4 97 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 PSCAO43653 123 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 ERC2-IT1O76042 136 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 IGKV3-20P01619 116 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 HMGA2P52926 109 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 UBE2G1P62253 170 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 CCL8P80075 99 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 ADIRFQ15847 76 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 LINC00483Q53H64 154 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 SLC48A1Q6P1K1 146 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 DEFB106AQ8N104 65 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 FAM213BQ8TBF2 198 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 MGST2Q99735 147 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 HIGD2AQ9BW72 106 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 MRPL35Q9NZE8 188 aaKnown RBP3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 KLK12Q9UKR0 248 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 TACC2O95359 2948 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 DNHD1Q96M86 4753 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 MUC22E2RYF6 1773 aaPredicted RBP3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 NUMA1Q14980 2115 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 MALRD1Q5VYJ5 2156 aa3.58□□□□□ -1.84
CBX1P3-201ENST00000413296 IGLV2-18A0A075B6J9 118 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 TRAV17A0A0B4J275 112 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 TCRBV4S1A1TA0A5B7 111 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 NUPR1O60356 82 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 ANK1P16157 1881 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 DEFB113Q30KQ7 82 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 ZNF791Q3KP31 576 aaPredicted RBP3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 ZCCHC23Q6ZST2 131 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 C9orf106Q8NAJ2 232 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 CEP192Q8TEP8 1941 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 SCRT1Q9BWW7 348 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 DOCK9Q9BZ29 2069 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 MYO16Q9Y6X6 1858 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 PDZD2O15018 2839 aa3.57□□□□□ -1.84
CBX1P3-201ENST00000413296 MTORP42345 2549 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 F8P00451 2351 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 APCP25054 2843 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 ASAH2BP0C7U1 165 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 GNG11P61952 73 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 NDPQ00604 133 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 ST20Q9HBF5 79 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 KIF25-AS1Q9Y6Z4 181 aa3.56□□□□□ -1.84
CBX1P3-201ENST00000413296 CCDC88CQ9P219 2028 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 IGKV3D-11A0A0A0MRZ8 115 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 ODF3BA8MYP8 253 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 H3BRM9 83 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 HINT1P49773 126 aaPredicted RBP3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 SEC11AP67812 179 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 ERHP84090 104 aaKnown RBP3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 C9orf116Q5BN46 136 aaPredicted RBP3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 C2orf82Q6UX34 121 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 MYOZ3Q8TDC0 251 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 PPDPFLQ8WWR9 84 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 SPCS1Q9Y6A9 102 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 BSNQ9UPA5 3926 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 MED13LQ71F56 2210 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 HIVEP1P15822 2718 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 ATRQ13535 2644 aa3.55□□□□□ -1.84
CBX1P3-201ENST00000413296 TCHHQ07283 1943 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 FN1P02751 2386 aaKnown RBP3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 CPAMD8Q8IZJ3 1885 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 CELSR1Q9NYQ6 3014 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 TMSB15BA0A087X1C1 80 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 IGKV3-11P04433 115 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 S100ZQ8WXG8 99 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 VOPP1Q96AW1 172 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 CYTL1Q9NRR1 136 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 LINC00474Q9P2X8 69 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 SCN3AQ9NY46 2000 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 ICE1Q9Y2F5 2266 aa3.54□□□□□ -1.84
CBX1P3-201ENST00000413296 CSMD1Q96PZ7 3565 aa3.53□□□□□ -1.84
CBX1P3-201ENST00000413296 RNASE2P10153 161 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms