RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 ZNRF2Q8NHG8 242 aa12.61□□□□□ -0.39
CROCCP2-202ENST00000412962 DNAJC30Q96LL9 226 aa12.61□□□□□ -0.39
CROCCP2-202ENST00000412962 CARD19Q96LW7 228 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 IGLV4-3A0A075B6K6 122 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 TRBV20-1A0A075B6N2 111 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 ZNF815PA8K554 130 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 TAL2Q16559 108 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 NOP10Q9NPE3 64 aaKnown RBP12.6□□□□□ -0.39
CROCCP2-202ENST00000412962 M0QXV9 152 aa12.59□□□□□ -0.39
CROCCP2-202ENST00000412962 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
CROCCP2-202ENST00000412962 VCX2Q9H322 139 aa12.59□□□□□ -0.39
CROCCP2-202ENST00000412962 HERVK_113P61574 105 aa12.59□□□□□ -0.39
CROCCP2-202ENST00000412962 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
CROCCP2-202ENST00000412962 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
CROCCP2-202ENST00000412962 C16orf74Q96GX8 76 aa12.58□□□□□ -0.39
CROCCP2-202ENST00000412962 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
CROCCP2-202ENST00000412962 CCDC179H3BU77 68 aa12.58□□□□□ -0.4
CROCCP2-202ENST00000412962 PSMB2P49721 201 aa12.58□□□□□ -0.4
CROCCP2-202ENST00000412962 PYGO1Q9Y3Y4 419 aa12.58□□□□□ -0.4
CROCCP2-202ENST00000412962 PLAC8L1A1L4L8 177 aa12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 DAZ2Q13117 558 aaKnown RBP12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 LOC107984156A0A0G2JMH3 177 aa12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 CRLF1O75462 422 aa12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 ARL17AQ8IVW1 177 aa12.57□□□□□ -0.4
CROCCP2-202ENST00000412962 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
CROCCP2-202ENST00000412962 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
CROCCP2-202ENST00000412962 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
CROCCP2-202ENST00000412962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
CROCCP2-202ENST00000412962 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
CROCCP2-202ENST00000412962 VWFP04275 2813 aa12.55□□□□□ -0.4
CROCCP2-202ENST00000412962 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
CROCCP2-202ENST00000412962 K7EQD1 137 aa12.54□□□□□ -0.4
CROCCP2-202ENST00000412962 A0A0J9YXV3 536 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 GAGE7O76087 117 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 GAGE12FP0CL80 117 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 GAGE12GP0CL81 117 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 GAGE12IP0CL82 117 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.48e-9■□□□□ 10.3
CROCCP2-202ENST00000412962 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 ZFAND6Q6FIF0 208 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 AMELXQ99217 191 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 UBE2D4Q9Y2X8 147 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 TENM1Q9UKZ4 2725 aa12.53□□□□□ -0.4
CROCCP2-202ENST00000412962 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.4
CROCCP2-202ENST00000412962 C3orf56Q8N813 242 aa12.52□□□□□ -0.4
CROCCP2-202ENST00000412962 SPANXA1Q9NS26 97 aa12.52□□□□□ -0.4
CROCCP2-202ENST00000412962 NBEAL2Q6ZNJ1 2754 aa12.52□□□□□ -0.4
CROCCP2-202ENST00000412962 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 TRBV10-1A0A0K0K1A3 114 aa12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 ZNF22P17026 224 aaPredicted RBP12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 RPL36AP83881 106 aaKnown RBP12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 RPL36ALQ969Q0 106 aaKnown RBP12.52□□□□□ -0.41
CROCCP2-202ENST00000412962 IGHV3-64A0A075B6Q5 118 aa12.51□□□□□ -0.41
CROCCP2-202ENST00000412962 OVOL2Q9BRP0 275 aa12.51□□□□□ -0.41
CROCCP2-202ENST00000412962 TMEM223A0PJW6 202 aa12.5□□□□□ -0.41
CROCCP2-202ENST00000412962 GAGE12JA6NER3 117 aa12.49□□□□□ -0.41
CROCCP2-202ENST00000412962 J3QQQ9 107 aa12.49□□□□□ -0.41
CROCCP2-202ENST00000412962 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
CROCCP2-202ENST00000412962 GAGE4Q13068 117 aa12.49□□□□□ -0.41
CROCCP2-202ENST00000412962 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
CROCCP2-202ENST00000412962 PPDPFLQ8WWR9 84 aa12.48□□□□□ -0.41
CROCCP2-202ENST00000412962 ATRQ13535 2644 aa12.48□□□□□ -0.41
CROCCP2-202ENST00000412962 A0A0J9YY99 117 aa12.47□□□□□ -0.41
CROCCP2-202ENST00000412962 UBE2D3P61077 147 aa12.47□□□□□ -0.41
CROCCP2-202ENST00000412962 UBE2D2P62837 147 aa12.47□□□□□ -0.41
CROCCP2-202ENST00000412962 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
CROCCP2-202ENST00000412962 DAZ4Q86SG3 579 aaKnown RBP12.47□□□□□ -0.41
CROCCP2-202ENST00000412962 DAZ3Q9NR90 486 aaKnown RBP12.47□□□□□ -0.41
CROCCP2-202ENST00000412962 LEPROTO15243 131 aa12.46□□□□□ -0.41
CROCCP2-202ENST00000412962 TEN1Q86WV5 123 aa12.46□□□□□ -0.41
CROCCP2-202ENST00000412962 ANKRD29Q8N6D5 301 aa12.46□□□□□ -0.41
CROCCP2-202ENST00000412962 TEP1Q99973 2627 aaKnown RBP12.45□□□□□ -0.42
CROCCP2-202ENST00000412962 TRGV4A0A0C4DH28 118 aa12.45□□□□□ -0.42
CROCCP2-202ENST00000412962 TCL1BO95988 128 aa12.45□□□□□ -0.42
CROCCP2-202ENST00000412962 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
CROCCP2-202ENST00000412962 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
CROCCP2-202ENST00000412962 NTM-AS1Q6ZSK4 140 aa12.45□□□□□ -0.42
CROCCP2-202ENST00000412962 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
CROCCP2-202ENST00000412962 LINC00694P0DN24 101 aa12.44□□□□□ -0.42
CROCCP2-202ENST00000412962 TIMM21Q9BVV7 248 aa12.44□□□□□ -0.42
CROCCP2-202ENST00000412962 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
CROCCP2-202ENST00000412962 TRBV6-4A0A1B0GX49 114 aa12.43□□□□□ -0.42
CROCCP2-202ENST00000412962 F8P00451 2351 aa12.42□□□□□ -0.42
CROCCP2-202ENST00000412962 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
CROCCP2-202ENST00000412962 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
CROCCP2-202ENST00000412962 X6R8D5 127 aa12.42□□□□□ -0.42
CROCCP2-202ENST00000412962 UBE2D1P51668 147 aa12.41□□□□□ -0.42
CROCCP2-202ENST00000412962 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
CROCCP2-202ENST00000412962 FHL2Q14192 279 aa12.41□□□□□ -0.42
CROCCP2-202ENST00000412962 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
CROCCP2-202ENST00000412962 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
CROCCP2-202ENST00000412962 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
CROCCP2-202ENST00000412962 IGHV3-30-3P0DP02 117 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms